RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 OXNAD1Q96HP4 312 aaPredicted RBP3.54□□□□□ -1.84
RNU6-28P-201ENST00000362378 SGK494Q96LW2 274 aa3.54□□□□□ -1.84
RNU6-28P-201ENST00000362378 TMEM204Q9BSN7 226 aa3.54□□□□□ -1.84
RNU6-28P-201ENST00000362378 ARRDC1-AS1Q9H2J1 176 aa3.54□□□□□ -1.84
RNU6-28P-201ENST00000362378 FN3KQ9H479 309 aa3.54□□□□□ -1.84
RNU6-28P-201ENST00000362378 CDH20Q9HBT6 801 aa3.54□□□□□ -1.84
RNU6-28P-201ENST00000362378 TRPC7Q9HCX4 862 aa3.54□□□□□ -1.84
RNU6-28P-201ENST00000362378 SERINC1Q9NRX5 453 aa3.54□□□□□ -1.84
RNU6-28P-201ENST00000362378 ZNF701Q9NV72 531 aaPredicted RBP3.54□□□□□ -1.84
RNU6-28P-201ENST00000362378 ERAP1Q9NZ08 941 aa3.54□□□□□ -1.84
RNU6-28P-201ENST00000362378 LEF1Q9UJU2 399 aaPredicted RBP3.54□□□□□ -1.84
RNU6-28P-201ENST00000362378 POU2F3Q9UKI9 436 aa3.54□□□□□ -1.84
RNU6-28P-201ENST00000362378 KCNK7Q9Y2U2 307 aa3.54□□□□□ -1.84
RNU6-28P-201ENST00000362378 IGSF1Q8N6C5 1336 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 PCDH11YQ9BZA8 1340 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 IGHV4OR15-8A0A075B7B6 117 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 A4D1N5 150 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 ASPDHA6ND91 283 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 OOEPA6NGQ2 149 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 INO80B-WBP1J3KQ70 363 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 FMO6PO60774 539 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 RNASEH1O60930 286 aaKnown RBP3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 ACSL3O95573 720 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 IGKV2-30P06310 120 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 VIMP08670 466 aaKnown RBP3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 ACP2P11117 423 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 EPCAMP16422 314 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 CBLP22681 906 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 ACAT1P24752 427 aaKnown RBP3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 PTGER4P35408 488 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 GMPSP49915 693 aaPredicted RBP3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 UBASH3AP57075 661 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 DSCR9P59020 149 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 DLK1P80370 383 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 EEF1A2Q05639 463 aaKnown RBP3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 GAGE5Q13069 117 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 GAGE6Q13070 117 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 NFE2L1Q14494 772 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 RRS1Q15050 365 aaKnown RBP3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 TCTE1Q5JU00 501 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 NOTUMQ6P988 496 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 IYDQ6PHW0 289 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 ENPP7Q6UWV6 458 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 C15orf39Q6ZRI6 1047 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 NUP54Q7Z3B4 507 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 PIWIL4Q7Z3Z4 852 aaKnown RBP3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 DSG4Q86SJ6 1040 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 LONP2Q86WA8 852 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 NUDT13Q86X67 352 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 SPATA2LQ8IUW3 424 aaPredicted RBP3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 FAM219AQ8IW50 185 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 NUP93Q8N1F7 819 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 CRYBG2Q8N1P7 616 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 ARHGAP24Q8N264 748 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 TRIML1Q8N9V2 468 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 FGFBP3Q8TAT2 258 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 RAD54LQ92698 747 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 DNASE1L2Q92874 299 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 NEUROG1Q92886 237 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 PTP4A1Q93096 173 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 LINGO1Q96FE5 620 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 ZNF479Q96JC4 524 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 SPATA33Q96N06 139 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 FUT8Q9BYC5 575 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 TM6SF1Q9BZW5 370 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 DNAJC4Q9NNZ3 241 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 EVPLQ92817 2033 aa3.53□□□□□ -1.84
RNU6-28P-201ENST00000362378 A0A1W2PPI3 338 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 A0A1W2PPK0 400 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 E9PI62 339 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 FAM86B1E9PN63 330 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 GAPDHSO14556 408 aaPredicted RBP3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 SYNGR3O43761 229 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 GOSR1O95249 250 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 MOCS3O95396 460 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 BAG4O95429 457 aaKnown RBP3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 ZBTB11O95625 1053 aaPredicted RBP3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 PPP1R3DO95685 299 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 BMP15O95972 392 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 NGFRP08138 427 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 INHBAP08476 426 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 FAM86B2P0C5J1 330 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 SMIM18P0DKX4 95 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 ATP6V1B1P15313 513 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 CKMT2P17540 419 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 CDKN2AP42771 156 aaKnown RBP3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 FUT6P51993 359 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 THOP1P52888 689 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 CLDN15P56746 228 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 PTENP60484 403 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 KIR2DS3Q14952 304 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 CA9Q16790 459 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 ANKRD20A4Q4UJ75 823 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 ODF2Q5BJF6 829 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 ANKRD20A8PQ5CZ79 823 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 ANKRD20A2Q5SQ80 823 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 SPOUT1Q5T280 376 aaKnown RBP3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 ANKRD20A1Q5TYW2 823 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 ANKRD20A3Q5VUR7 823 aa3.52□□□□□ -1.85
RNU6-28P-201ENST00000362378 SLC27A1Q6PCB7 646 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms