RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 GLIS1Q8NBF1 620 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 TFGQ92734 400 aaPredicted RBP18.23■□□□□ 0.51
CLIP2-202ENST00000361545 NUSAP1Q9BXS6 441 aaKnown RBP18.23■□□□□ 0.51
CLIP2-202ENST00000361545 TEX28O15482 410 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 RFPL2O75678 378 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 CYBAP13498 195 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.23■□□□□ 0.51
CLIP2-202ENST00000361545 ADGRG6Q86SQ4 1221 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 PQLC1Q8N2U9 271 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 UBASH3BQ8TF42 649 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 DUSP26Q9BV47 211 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 OSBPL11Q9BXB4 747 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 CMTM6Q9NX76 183 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 ABI3Q9P2A4 366 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 SPATA2Q9UM82 520 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 H0YC42 278 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 NDUFS4O43181 175 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 KLF8O95600 359 aaPredicted RBP18.22■□□□□ 0.51
CLIP2-202ENST00000361545 HERVK_113P63132 956 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 KLF1Q13351 362 aaPredicted RBP18.22■□□□□ 0.51
CLIP2-202ENST00000361545 SERINC3Q13530 473 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 SLC9A4Q6AI14 798 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 MZT2AQ6P582 158 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 CNTD1Q8N815 330 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 ZBED6CLQ96FA7 236 aaPredicted RBP18.22■□□□□ 0.51
CLIP2-202ENST00000361545 P2RY13Q9BPV8 354 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 TAPBPLQ9BX59 468 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 ERVK-6Q9BXR3 956 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 GSDMCQ9BYG8 508 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 SSU72Q9NP77 194 aaKnown RBP18.22■□□□□ 0.51
CLIP2-202ENST00000361545 ERI3O43414 337 aaKnown RBP18.22■□□□□ 0.51
CLIP2-202ENST00000361545 IL7RP16871 459 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 RCVRNP35243 200 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 CCNIQ14094 377 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 RTP2Q5QGT7 225 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 TRIM74Q86UV6 250 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 C10orf71Q711Q0 1435 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 PLEKHG6Q3KR16 790 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 TCEAL5Q5H9L2 206 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 DCST1Q5T197 706 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 PGAM4Q8N0Y7 254 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 Q8N9G6 341 aaPredicted RBP18.22■□□□□ 0.51
CLIP2-202ENST00000361545 PIK3C3Q8NEB9 887 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 TMEM40Q8WWA1 233 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 MYH2Q9UKX2 1941 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 C2orf78A6NCI8 922 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 ZNF623O75123 536 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 WFS1O76024 890 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 SLC13A3Q8WWT9 602 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 SLC38A4Q969I6 547 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 SPHK2Q9NRA0 654 aa18.22■□□□□ 0.51
CLIP2-202ENST00000361545 IQCMA0A1B0GVH7 501 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 MEIS3P2A8K0S8 358 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 hCG_2039718K7EN88 272 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 C4BPBP20851 252 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 ARCN1P48444 511 aaKnown RBP18.21■□□□□ 0.51
CLIP2-202ENST00000361545 STK19P49842 368 aaPredicted RBP18.21■□□□□ 0.51
CLIP2-202ENST00000361545 TMEM164Q5U3C3 297 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 AAGABQ6PD74 315 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 AHSGP02765 367 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 SRP54P61011 504 aaKnown RBP18.21■□□□□ 0.51
CLIP2-202ENST00000361545 HYAL2Q12891 473 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 Q6ZVL8 140 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 FAM156AQ8NDB6 213 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 EEF1AKMT1Q8WVE0 214 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 OVCA2Q8WZ82 227 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 SH3GL2Q99962 352 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 CTPS2Q9NRF8 586 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 GNB5O14775 395 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 MTPNP58546 118 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 KCNJ11Q14654 390 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 RBM20Q5T481 1227 aaKnown RBP18.21■□□□□ 0.51
CLIP2-202ENST00000361545 NUDT13Q86X67 352 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 PQLC3Q8N755 202 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 NEK7Q8TDX7 302 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 SAMD11Q96NU1 681 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 FCRL4Q96PJ5 515 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 YIPF4Q9BSR8 244 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 CLCA3PQ9Y6N3 262 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 CDC7O00311 574 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 IGFBP5P24593 272 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 MYL9P24844 172 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 HNMTP50135 292 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 CDH12P55289 794 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 PITX1P78337 314 aaPredicted RBP18.21■□□□□ 0.51
CLIP2-202ENST00000361545 OC90Q02509 493 aaPredicted RBP18.21■□□□□ 0.51
CLIP2-202ENST00000361545 GPRIN1Q7Z2K8 1008 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 FITM2Q8N6M3 262 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 EFCAB11Q9BUY7 163 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 NKX2-4Q9H2Z4 354 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 ELAC1Q9H777 363 aaKnown RBP18.21■□□□□ 0.51
CLIP2-202ENST00000361545 SFXN1Q9H9B4 322 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 TESMINQ9Y4I5 508 aa18.21■□□□□ 0.51
CLIP2-202ENST00000361545 PSMD11O00231 422 aa18.2■□□□□ 0.5
CLIP2-202ENST00000361545 LEFTY1O75610 366 aa18.2■□□□□ 0.5
CLIP2-202ENST00000361545 POU2F1P14859 743 aa18.2■□□□□ 0.5
CLIP2-202ENST00000361545 IMPDH1P20839 514 aa18.2■□□□□ 0.5
CLIP2-202ENST00000361545 CCKBRP32239 447 aa18.2■□□□□ 0.5
CLIP2-202ENST00000361545 CDK9P50750 372 aaKnown RBP18.2■□□□□ 0.5
CLIP2-202ENST00000361545 KLHL17Q6TDP4 642 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms