RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 WDR37Q9Y2I8 494 aa17.69■□□□□ 0.42
SMARCD3-202ENST00000356800 A0A0C4DFX4 3053 aa17.69■□□□□ 0.42
SMARCD3-202ENST00000356800 SPTY2D1-AS1A0A0U1RR47 76 aa17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 A0A1B0GTL3 188 aa17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 A0A1W2PR77 199 aa17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 MAP3K13O43283 966 aa17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 KCNJ13O60928 360 aa17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 WNT1P04628 370 aa17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 HIST1H2AGP0C0S8 130 aaPredicted RBP17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 HIST1H2ADP20671 130 aa17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 GDF5P43026 501 aa17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 CLCNKAP51800 687 aa17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 CLCQ05315 142 aa17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 EIF2B5Q13144 721 aaKnown RBP17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 FZD2Q14332 565 aa17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 CAPRIN2Q6IMN6 1127 aaKnown RBP17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 CCDC121Q6ZUS5 278 aa17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 TMEM105Q8N8V8 129 aa17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 FBXO15Q8NCQ5 510 aaPredicted RBP17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 C1orf216Q8TAB5 229 aa17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 HIST1H2AHQ96KK5 128 aa17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 HIST1H2AJQ99878 128 aa17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 H2AFJQ9BTM1 129 aa17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 TMEM168Q9H0V1 697 aa17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 WWOXQ9NZC7 414 aa17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 CIDEBQ9UHD4 219 aa17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 TNPO3Q9Y5L0 923 aaKnown RBP17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 TP53BP1Q12888 1972 aaPredicted RBP17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 TDRD6O60522 2096 aaKnown RBP17.68■□□□□ 0.42
SMARCD3-202ENST00000356800 MEI4A8MW99 385 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 HDAC3O15379 428 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 KIAA0754O94854 1291 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 MAP4P27816 1152 aaKnown RBP17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 GGT5P36269 586 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 SH3BP2P78314 561 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 LAYNQ6UX15 382 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 UNC5DQ6UXZ4 953 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 CUZD1Q86UP6 607 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 HID1Q8IV36 788 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 PHC3Q8NDX5 983 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 CCL4L1Q8NHW4 92 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 TRPC4APQ8TEL6 797 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 FBXL8Q96CD0 374 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 KLHDC7BQ96G42 594 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 PKP4Q99569 1192 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 CD244Q9BZW8 370 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 SEMA4BQ9NPR2 832 aaPredicted RBP17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 HEY2Q9UBP5 337 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 KLF15Q9UIH9 416 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 DGKBQ9Y6T7 804 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 KNL1Q8NG31 2342 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 TMEM233B4DJY2 109 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 LAMTOR5O43504 91 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 CTBSQ01459 385 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 PTK2BQ14289 1009 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 TCEA2Q15560 299 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 GALNTL6Q49A17 601 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 SPDYAQ5MJ70 313 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 METTL2BQ6P1Q9 378 aaKnown RBP17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 EPGNQ6UW88 154 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 WDR5BQ86VZ2 330 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 MFSD2AQ8NA29 543 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 OR5AR1Q8NGP9 310 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 FAM174AQ8TBP5 190 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 TFGQ92734 400 aaPredicted RBP17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 SKA1Q96BD8 255 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 FAR2Q96K12 515 aa17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 DUSP15Q9H1R2 295 aaPredicted RBP17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 TCEAL2Q9H3H9 227 aaPredicted RBP17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 CFAP20Q9Y6A4 193 aaKnown RBP17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 ARHGEF17Q96PE2 2063 aaPredicted RBP17.67■□□□□ 0.42
SMARCD3-202ENST00000356800 TNRC6BQ9UPQ9 1833 aaKnown RBP17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 MYO1CO00159 1063 aa17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 RASGRP1O95267 797 aa17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 SLC35G4P0C7Q5 338 aa17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 AK4P27144 223 aaPredicted RBP17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 SLC6A12P48065 614 aa17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 HNMTP50135 292 aa17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 IDH3AP50213 366 aa17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 RACK1P63244 317 aaKnown RBP17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 LCP2Q13094 533 aa17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 LACTB2Q53H82 288 aaPredicted RBP17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 SH2D4BQ5SQS7 431 aa17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 GOLGA7Q7Z5G4 137 aa17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 MTDHQ86UE4 582 aaKnown RBP17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 C1orf210Q8IVY1 113 aa17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 TCAIMQ8N3R3 496 aa17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 AFAP1L2Q8N4X5 818 aa17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 AGAP11Q8TF27 550 aa17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 DNASE2BQ8WZ79 361 aa17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 ERP27Q96DN0 273 aa17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 CCDC138Q96M89 665 aa17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 INSM2Q96T92 566 aaPredicted RBP17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 EBF4Q9BQW3 602 aa17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 HGH1Q9BTY7 390 aa17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 MIR1-1HGQ9H1L0 117 aa17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 TM9SF3Q9HD45 589 aa17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 PRDM8Q9NQV8 689 aa17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 STOX2Q9P2F5 926 aaPredicted RBP17.66■□□□□ 0.42
SMARCD3-202ENST00000356800 ZNF225Q9UK10 706 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms