RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 DOK6Q6PKX4 331 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 UTS2BQ765I0 119 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 R3HCC1LQ7Z5L2 792 aaKnown RBP14.47□□□□□ -0.09
NUP50-201ENST00000347635 GRIN3AQ8TCU5 1115 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 RANBP9Q96S59 729 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 TRIM8Q9BZR9 551 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 IGSF5Q9NSI5 407 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 VPS51Q9UID3 782 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 SCML2Q9UQR0 700 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 EFCAB9A8MZ26 197 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 G6PDP11413 515 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 EPORP19235 508 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 SLC11A1P49279 550 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 CARTPTQ16568 116 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 FCGR1BQ92637 280 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 CPQQ9Y646 472 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 MBLAC1A4D2B0 266 aaPredicted RBP14.47□□□□□ -0.09
NUP50-201ENST00000347635 CENPXA8MT69 81 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 MAGEB17A8MXT2 336 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 SOCS7O14512 581 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 UGT2B4P06133 528 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 TFPTP0C1Z6 253 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 TGFBIQ15582 683 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 KLHL35Q6PF15 583 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 NSUN5Q96P11 429 aaKnown RBP14.47□□□□□ -0.09
NUP50-201ENST00000347635 TMEM248Q9NWD8 314 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 MIOSQ9NXC5 875 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 PTGDR2Q9Y5Y4 395 aa14.47□□□□□ -0.09
NUP50-201ENST00000347635 PRNPP04156 253 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 CST5P28325 142 aaPredicted RBP14.46□□□□□ -0.09
NUP50-201ENST00000347635 MAPK9P45984 424 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 TAB1Q15750 504 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 MZT2BQ6NZ67 158 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 KLHL17Q6TDP4 642 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 GET4Q7L5D6 327 aaPredicted RBP14.46□□□□□ -0.09
NUP50-201ENST00000347635 CMTR2Q8IYT2 770 aaKnown RBP14.46□□□□□ -0.09
NUP50-201ENST00000347635 PCSK2P16519 638 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 UGT2B15P54855 530 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 RAB14P61106 215 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 MYBPC3Q14896 1274 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 LCN8Q6JVE9 175 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 USP43Q70EL4 1123 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 NANOGNBQ7Z5D8 188 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 EEF1AKMT1Q8WVE0 214 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 TMIGD2Q96BF3 282 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 SOX17Q9H6I2 414 aaPredicted RBP14.46□□□□□ -0.09
NUP50-201ENST00000347635 SGK2Q9HBY8 427 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 ARMC1Q9NVT9 282 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 DUS2Q9NX74 493 aaKnown RBP14.46□□□□□ -0.09
NUP50-201ENST00000347635 ZNF221Q9UK13 617 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 SSR3Q9UNL2 185 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 PEX16Q9Y5Y5 336 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 PER2O15055 1255 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 ERN1O75460 977 aaKnown RBP14.46□□□□□ -0.09
NUP50-201ENST00000347635 IFNGR2P38484 337 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 CDKN2DP55273 166 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 TXNL4AP83876 142 aaKnown RBP14.46□□□□□ -0.09
NUP50-201ENST00000347635 COX10Q12887 443 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 CYP2A13Q16696 494 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 GOLGA7Q7Z5G4 137 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 DNAJB7Q7Z6W7 309 aaPredicted RBP14.46□□□□□ -0.09
NUP50-201ENST00000347635 WDR36Q8NI36 951 aaKnown RBP14.46□□□□□ -0.09
NUP50-201ENST00000347635 PIH1D2Q8WWB5 315 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 HDAC2Q92769 488 aaKnown RBP14.46□□□□□ -0.09
NUP50-201ENST00000347635 CLP1Q92989 425 aaKnown RBP14.46□□□□□ -0.09
NUP50-201ENST00000347635 ERLEC1Q96DZ1 483 aa14.46□□□□□ -0.09
NUP50-201ENST00000347635 IMP4Q96G21 291 aaKnown RBP14.46□□□□□ -0.09
NUP50-201ENST00000347635 TBX18O95935 607 aa14.46□□□□□ -0.1
NUP50-201ENST00000347635 S1PR4O95977 384 aa14.46□□□□□ -0.1
NUP50-201ENST00000347635 ACVRL1P37023 503 aa14.46□□□□□ -0.1
NUP50-201ENST00000347635 GALNT1Q10472 559 aaPredicted RBP14.46□□□□□ -0.1
NUP50-201ENST00000347635 PYDC2Q56P42 97 aa14.46□□□□□ -0.1
NUP50-201ENST00000347635 SLC39A5Q6ZMH5 540 aa14.46□□□□□ -0.1
NUP50-201ENST00000347635 MAVSQ7Z434 540 aa14.46□□□□□ -0.1
NUP50-201ENST00000347635 EPHX4Q8IUS5 362 aa14.46□□□□□ -0.1
NUP50-201ENST00000347635 CHPFQ8IZ52 775 aa14.46□□□□□ -0.1
NUP50-201ENST00000347635 OR4F6Q8NGB9 312 aa14.46□□□□□ -0.1
NUP50-201ENST00000347635 RHEBL1Q8TAI7 183 aa14.46□□□□□ -0.1
NUP50-201ENST00000347635 KLHL28Q9NXS3 571 aa14.46□□□□□ -0.1
NUP50-201ENST00000347635 WDR37Q9Y2I8 494 aa14.46□□□□□ -0.1
NUP50-201ENST00000347635 CEPT1Q9Y6K0 416 aa14.46□□□□□ -0.1
NUP50-201ENST00000347635 K7EPI3 171 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 AREL1O15033 823 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 OR10H3O60404 316 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 RPLP0P05388 317 aaKnown RBP14.45□□□□□ -0.1
NUP50-201ENST00000347635 HSD17B1P14061 328 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 CD36P16671 472 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 GPR1P46091 355 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 TPTEP56180 551 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 EMX2Q04743 252 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 MS4A13Q5J8X5 152 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 UBE2E3Q969T4 207 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 L3HYPDHQ96EM0 354 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 ZNF597Q96LX8 424 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 RDH12Q96NR8 316 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 RAD9AQ99638 391 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 IL12RB2Q99665 862 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 CHCHD6Q9BRQ6 235 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 COPS4Q9BT78 406 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 EBPLQ9BY08 206 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms