RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 CCDC160A6NGH7 325 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 SLC38A8A6NNN8 435 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 ANKRD66B4E2M5 251 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 H3BSA7 217 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 BTN3A1O00481 513 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 PRMT5O14744 637 aaPredicted RBP10.57□□□□□ -0.72
RTN3-201ENST00000338850 PRAMEF12O95522 483 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 OTCP00480 354 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 RAP2AP10114 183 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 GABRR2P28476 465 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 MAPK8P45983 427 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 CSNK1DP48730 415 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 TUFMP49411 452 aaKnown RBP10.57□□□□□ -0.72
RTN3-201ENST00000338850 CLCN7P51798 805 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 AP1S1P61966 158 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 MTAPQ13126 283 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 PWP1Q13610 501 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 VEPH1Q14D04 833 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 CYP51A1Q16850 503 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 CYBRD1Q53TN4 286 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 NANOGP8Q6NSW7 305 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 NCEH1Q6PIU2 408 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 TSSK4Q6SA08 328 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 MSANTD1Q6ZTZ1 278 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 METTL3Q86U44 580 aaKnown RBP10.57□□□□□ -0.72
RTN3-201ENST00000338850 SPPL2CQ8IUH8 684 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 SVOPLQ8N434 492 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 MDGA1Q8NFP4 955 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 PROKR1Q8TCW9 393 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 SH3RF2Q8TEC5 729 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 FAM3CQ92520 227 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 TRMT2BQ96GJ1 504 aaKnown RBP10.57□□□□□ -0.72
RTN3-201ENST00000338850 MAGED4Q96JG8 741 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 LRRC3BQ96PB8 259 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 SLC30A3Q99726 388 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 SH3GL1Q99961 368 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 SLC39A3Q9BRY0 314 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 SLC29A3Q9BZD2 475 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 CAAP1Q9H8G2 361 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 NANOGQ9H9S0 305 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 IL21Q9HBE4 155 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 RDH14Q9HBH5 336 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 PLGRKTQ9HBL7 147 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 SEMA4BQ9NPR2 832 aaPredicted RBP10.57□□□□□ -0.72
RTN3-201ENST00000338850 ZSCAN32Q9NX65 697 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 PKD2L2Q9NZM6 624 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 TRPS1Q9UHF7 1281 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 OAZ3Q9UMX2 235 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 FADS3Q9Y5Q0 445 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 AP1M2Q9Y6Q5 423 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 CEP250Q9BV73 2442 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 DENND4CQ5VZ89 1909 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 TRBV5-4A0A0C4DH59 114 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 RNF103-CHMP3A0A140T963 221 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 SERTM1A2A2V5 107 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 SAC3D1A6NKF1 404 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 CDC7O00311 574 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 SLC28A1O00337 649 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 CCL22O00626 93 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 PPP6CO00743 305 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 RAD51BO15315 384 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 STX7O15400 261 aaKnown RBP10.56□□□□□ -0.72
RTN3-201ENST00000338850 CLOCKO15516 846 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 LILRB5O75023 590 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 ANXA6P08133 673 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 RHOCP08134 193 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 LINC00032P0C843 101 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 TDGF1P13385 188 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 ARSAP15289 507 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 GGT1P19440 569 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 PRPH2P23942 346 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 HRH2P25021 359 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 PCSK6P29122 969 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 WEE1P30291 646 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 OXTRP30559 389 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 FMO4P31512 558 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 SLC6A4P31645 630 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 MC4RP32245 332 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 HMGCLP35914 325 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 ID4P47928 161 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 RGS4P49798 205 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 SCNN1BP51168 640 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 ALDH3A2P51648 485 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 ATXN3P54252 364 aaPredicted RBP10.56□□□□□ -0.72
RTN3-201ENST00000338850 DIO3P55073 304 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 CYP4F8P98187 520 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 PLOD1Q02809 727 aaPredicted RBP10.56□□□□□ -0.72
RTN3-201ENST00000338850 ZNF33BQ06732 778 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 IL18R1Q13478 541 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 BIRC2Q13490 618 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 KIAA0040Q15053 153 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 TGFBIQ15582 683 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 RFX4Q33E94 735 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 ARHGAP15Q53QZ3 475 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 PAGE3Q5JUK9 113 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 RBM48Q5RL73 367 aaKnown RBP10.56□□□□□ -0.72
RTN3-201ENST00000338850 ZNF773Q6PK81 442 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 DLEU7Q6UYE1 221 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 MAMSTRQ6ZN01 415 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 Q6ZSR9 355 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms