RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 MYL6P60660 151 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 ABATP80404 500 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 CYP4F8P98187 520 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 NUCB1Q02818 461 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 BST2Q10589 180 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 EPS8Q12929 822 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 SLC9A5Q14940 896 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 ZNF181Q2M3W8 571 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 BTBD16Q32M84 506 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 CCSMST1Q4G0I0 132 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 NADK2Q4G0N4 442 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 SLC39A12Q504Y0 691 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 DENND5AQ6IQ26 1287 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 FAM166AQ6J272 317 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 RETSATQ6NUM9 610 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 ARHGAP11AQ6P4F7 1023 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 C12orf54Q6X4T0 127 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 CYB5R4Q7L1T6 521 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 TAOK1Q7L7X3 1001 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 PIWIL3Q7Z3Z3 882 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 R3HCC1LQ7Z5L2 792 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 IRF2BP2Q7Z5L9 587 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 METTL25Q8N6Q8 603 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 DDHD1Q8NEL9 900 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 GRHL3Q8TE85 626 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 DACT3Q96B18 629 aaPredicted RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 SARAFQ96BY9 339 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 SGCZQ96LD1 299 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 TRIM51Q9BSJ1 452 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 BBS2Q9BXC9 721 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 ILKAPQ9H0C8 392 aaPredicted RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 FAM49AQ9H0Q0 323 aaPredicted RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 CPVLQ9H3G5 476 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 ACTL8Q9H568 366 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 RTN4Q9NQC3 1192 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 MBNL1Q9NR56 388 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 FAM114A2Q9NRY5 505 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 IMP3Q9NV31 184 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 FAIMQ9NVQ4 179 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 TESQ9UGI8 421 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 CDC23Q9UJX2 597 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 GPR45Q9Y5Y3 372 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 FAM169AQ9Y6X4 670 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 GOLGA8AA7E2F4 631 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 SCAMP2O15127 329 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 KMOO15229 486 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 RAMP3O60896 148 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 TRIM3O75382 744 aaPredicted RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 TNFRSF6BO95407 300 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 CRTAMO95727 393 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 C6orf47O95873 294 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 SOD1P00441 154 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 NGFP01138 241 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 ERVK-10P10266 1014 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 FCGR2AP12318 317 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 COX5AP20674 150 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 RFC1P35251 1148 aaPredicted RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 STARP49675 285 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 DIO3P55073 304 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 MLF1P58340 268 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 DAOAP59103 153 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 SNRPD1P62314 119 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 ILF3Q12906 894 aaKnown RBP eCLIP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 CNGA2Q16280 664 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 ZNF568Q3ZCX4 644 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 Q5PR19 223 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 SEL1L3Q68CR1 1132 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 DSTYKQ6XUX3 929 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 ZNF534Q76KX8 674 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 SLC26A9Q7LBE3 791 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 FCHSD1Q86WN1 690 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 TMEM25Q86YD3 366 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 SIX6OS1Q8N1H7 587 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 CLEC1AQ8NC01 280 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 FBF1Q8TES7 1133 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 SLC22A18Q96BI1 424 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 RHBDF1Q96CC6 855 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 PAGE5Q96GU1 130 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 GDAP1L1Q96MZ0 367 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 NUDCD1Q96RS6 583 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 SEC62Q99442 399 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 SMOQ99835 787 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 MGME1Q9BQP7 344 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 NUP85Q9BW27 656 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 ZNF416Q9BWM5 594 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 REG4Q9BYZ8 158 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 HAPLN2Q9GZV7 340 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 TNMDQ9H2S6 317 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 DMRT3Q9NQL9 472 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 PLSCR4Q9NRQ2 329 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 LIMA1Q9UHB6 759 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 MRM2Q9UI43 246 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 ANAPC7Q9UJX3 599 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 INTS6Q9UL03 887 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 DYRK1BQ9Y463 629 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 AP4B1Q9Y6B7 739 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 NDUFB9Q9Y6M9 179 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 DNAH8Q96JB1 4490 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 A0A087WZY1 265 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 SERTM1A2A2V5 107 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms