RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 ZFP14Q9HCL3 533 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 PCDH12Q9NPG4 1184 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 AGPAT4Q9NRZ5 378 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 ZNHIT2Q9UHR6 403 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 USP22Q9UPT9 525 aa17.01■□□□□ 0.31
DDX28-201ENST00000332395 TCRBV5S2A0A599 114 aa17■□□□□ 0.31
DDX28-201ENST00000332395 TLL1O43897 1013 aa17■□□□□ 0.31
DDX28-201ENST00000332395 TPST1O60507 370 aa17■□□□□ 0.31
DDX28-201ENST00000332395 HIST1H2AGP0C0S8 130 aaPredicted RBP17■□□□□ 0.31
DDX28-201ENST00000332395 MPC1LP0DKB6 136 aa17■□□□□ 0.31
DDX28-201ENST00000332395 SMIM18P0DKX4 95 aa17■□□□□ 0.31
DDX28-201ENST00000332395 HIST1H2ADP20671 130 aa17■□□□□ 0.31
DDX28-201ENST00000332395 WEE1P30291 646 aa17■□□□□ 0.31
DDX28-201ENST00000332395 HOXA9P31269 272 aa17■□□□□ 0.31
DDX28-201ENST00000332395 NNMTP40261 264 aa17■□□□□ 0.31
DDX28-201ENST00000332395 DCDC1P59894 354 aa17■□□□□ 0.31
DDX28-201ENST00000332395 MYBPC1Q00872 1141 aa17■□□□□ 0.31
DDX28-201ENST00000332395 PPIGQ13427 754 aaKnown RBP eCLIP17■□□□□ 0.31
DDX28-201ENST00000332395 FXNQ16595 210 aa17■□□□□ 0.31
DDX28-201ENST00000332395 CPSF6Q16630 551 aaKnown RBP eCLIP17■□□□□ 0.31
DDX28-201ENST00000332395 PLEKHS1Q5SXH7 462 aa17■□□□□ 0.31
DDX28-201ENST00000332395 ISLR2Q6UXK2 745 aa17■□□□□ 0.31
DDX28-201ENST00000332395 LRRC70Q7Z2Q7 622 aa17■□□□□ 0.31
DDX28-201ENST00000332395 TCAIMQ8N3R3 496 aa17■□□□□ 0.31
DDX28-201ENST00000332395 OTUB2Q96DC9 234 aa17■□□□□ 0.31
DDX28-201ENST00000332395 HIST1H2AHQ96KK5 128 aa17■□□□□ 0.31
DDX28-201ENST00000332395 ZBTB18Q99592 522 aa17■□□□□ 0.31
DDX28-201ENST00000332395 CGREF1Q99674 301 aa17■□□□□ 0.31
DDX28-201ENST00000332395 HIST1H2AJQ99878 128 aa17■□□□□ 0.31
DDX28-201ENST00000332395 H2AFJQ9BTM1 129 aa17■□□□□ 0.31
DDX28-201ENST00000332395 PIF1Q9H611 641 aa17■□□□□ 0.31
DDX28-201ENST00000332395 UPK3BL1B0FP48 263 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 CFAP99D6REC4 459 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 UPK3BL2E5RIL1 263 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 XYLBO75191 536 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 SEC22BO75396 215 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 TNFAIP8O95379 198 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 KRT6AP02538 564 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 KRT6BP04259 564 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 PSMC3P17980 439 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 FASP25445 335 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 IRS1P35568 1242 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 ETV3P41162 512 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 KRT6CP48668 564 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 PWP1Q13610 501 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 CBX2Q14781 532 aaPredicted RBP16.99■□□□□ 0.31
DDX28-201ENST00000332395 PLA2G4EQ3MJ16 856 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 CACHD1Q5VU97 1274 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 PPP4R4Q6NUP7 873 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 GRASPQ7Z6J2 395 aaPredicted RBP16.99■□□□□ 0.31
DDX28-201ENST00000332395 CHERPQ8IWX8 916 aaKnown RBP16.99■□□□□ 0.31
DDX28-201ENST00000332395 LIX1Q8N485 282 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 TRPV3Q8NET8 790 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 ING5Q8WYH8 240 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 BADQ92934 168 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 MTG2Q9H4K7 406 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 PLXNA2O75051 1894 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 TSPAN11A1L157 253 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 FAM149AA5PLN7 773 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 PABPN1LA6NDY0 278 aaKnown RBP16.99■□□□□ 0.31
DDX28-201ENST00000332395 SAC3D1A6NKF1 404 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 SOCS2O14508 198 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 CTSLP07711 333 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 FAM58BPP0C7Q3 252 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 TIMP2P16035 220 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 HNMTP50135 292 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 MTPNP58546 118 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 SP140Q13342 867 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 SELPLGQ14242 412 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 MAP7Q14244 749 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 ZNF697Q5TEC3 545 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 SATL1Q86VE3 508 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 RALGPS2Q86X27 583 aaPredicted RBP16.99■□□□□ 0.31
DDX28-201ENST00000332395 SLC13A3Q8WWT9 602 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 MTFMTQ96DP5 389 aaKnown RBP16.99■□□□□ 0.31
DDX28-201ENST00000332395 DPY30Q9C005 99 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 C1orf109Q9NX04 203 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 ASIC5Q9NY37 505 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 LMCD1Q9NZU5 365 aa16.99■□□□□ 0.31
DDX28-201ENST00000332395 ZFC3H1O60293 1989 aaKnown RBP16.99■□□□□ 0.31
DDX28-201ENST00000332395 GFYI3L273 518 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 KPNA5O15131 536 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 SGTAO43765 313 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 KCNH1O95259 989 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 ASLP04424 464 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 HNRNPA1P09651 372 aaKnown RBP eCLIP16.98■□□□□ 0.31
DDX28-201ENST00000332395 CEBPBP17676 345 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 HRH2P25021 359 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 SLC6A12P48065 614 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 CLCN2P51788 898 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 OR4D2P58180 307 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 PLIN5Q00G26 463 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 PTCHD3Q3KNS1 767 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 FAM174BQ3ZCQ3 159 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 PROSER1Q86XN7 944 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 GALNT13Q8IUC8 556 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 GLB1L3Q8NCI6 653 aaPredicted RBP16.98■□□□□ 0.31
DDX28-201ENST00000332395 ELMO1Q92556 727 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 HIC2Q96JB3 615 aa16.98■□□□□ 0.31
DDX28-201ENST00000332395 P2RY13Q9BPV8 354 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms