RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 CXADRP78310 365 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 CDK16Q00536 496 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 CACNG1Q06432 222 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 IL11RAQ14626 422 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 LLGL1Q15334 1064 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 SKIDA1Q1XH10 827 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 WIPI1Q5MNZ9 446 aaPredicted RBP6.18□□□□□ -1.42
SMG1-201ENST00000330588 CAPRIN2Q6IMN6 1127 aaKnown RBP6.18□□□□□ -1.42
SMG1-201ENST00000330588 TMEM220Q6QAJ8 160 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 CRTC3Q6UUV7 619 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 CERS6Q6ZMG9 384 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 USP53Q70EK8 1073 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 ATG4DQ86TL0 474 aaPredicted RBP6.18□□□□□ -1.42
SMG1-201ENST00000330588 SLC13A5Q86YT5 568 aaPredicted RBP6.18□□□□□ -1.42
SMG1-201ENST00000330588 JAMLQ86YT9 394 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 LRRC8AQ8IWT6 810 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 FAM71DQ8N9W8 422 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 OR8K5Q8NH50 307 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 KLHL6Q8WZ60 621 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.18□□□□□ -1.42
SMG1-201ENST00000330588 DCUN1D1Q96GG9 259 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 PLPPR2Q96GM1 343 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 C9orf72Q96LT7 481 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 COPS8Q99627 209 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 DESI2Q9BSY9 194 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 TMEM121Q9BTD3 319 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 ASB8Q9H765 288 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 KIR3DX1Q9H7L2 352 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 SUDS3Q9H7L9 328 aaPredicted RBP6.18□□□□□ -1.42
SMG1-201ENST00000330588 BPIFA1Q9NP55 256 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 SLC39A1Q9NY26 324 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 OGFRQ9NZT2 677 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 PAK5Q9P286 719 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 TRIM10Q9UDY6 481 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 CRLS1Q9UJA2 301 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 GUCA1BQ9UMX6 200 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 PRKAB1Q9Y478 270 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 SLC30A1Q9Y6M5 507 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 EPG5Q9HCE0 2579 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 TLCD2A6NGC4 264 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 EFCAB7A8K855 629 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 LIN7AO14910 233 aaPredicted RBP6.18□□□□□ -1.42
SMG1-201ENST00000330588 CASC3O15234 703 aaKnown RBP6.18□□□□□ -1.42
SMG1-201ENST00000330588 SGTAO43765 313 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 UGT1A9O60656 530 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 SNX2O60749 519 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 MTX2O75431 263 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 METTL18O95568 372 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 FAM87AP0C7U9 286 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 MTHFD1P11586 935 aaKnown RBP6.18□□□□□ -1.42
SMG1-201ENST00000330588 FGF5P12034 268 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 UGT1A6P19224 532 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 UGT1A1P22309 533 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 UGT1A4P22310 534 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 AKT1P31749 480 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 UGT1A3P35503 534 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 PPARGP37231 505 aaPredicted RBP6.18□□□□□ -1.42
SMG1-201ENST00000330588 ID3Q02535 119 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 ABHD18Q0P651 414 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 CDK5R2Q13319 367 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 MPP2Q14168 576 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 GPR18Q14330 331 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 CLCA4Q14CN2 919 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 RPS6KA1Q15418 735 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 RPE65Q16518 533 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 MANEAQ5SRI9 462 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 AADACL2Q6P093 401 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 ZNF449Q6P9G9 518 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 REC114Q7Z4M0 266 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 PLD6Q8N2A8 252 aaKnown RBP6.18□□□□□ -1.42
SMG1-201ENST00000330588 SPC24Q8NBT2 197 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 NCSTNQ92542 709 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 SGF29Q96ES7 293 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 SLC41A2Q96JW4 573 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 CATSPER2Q96P56 530 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 TTC1Q99614 292 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 TWSG1Q9GZX9 223 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 MVB12BQ9H7P6 319 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 UGT1A7Q9HAW7 530 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 UGT1A10Q9HAW8 530 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 UGT1A8Q9HAW9 530 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 SYTL2Q9HCH5 934 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 FOXJ2Q9P0K8 574 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 TUBD1Q9UJT1 453 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 TTC7AQ9ULT0 858 aaPredicted RBP6.18□□□□□ -1.42
SMG1-201ENST00000330588 PACSIN2Q9UNF0 486 aaPredicted RBP6.18□□□□□ -1.42
SMG1-201ENST00000330588 R3HDM2Q9Y2K5 976 aaKnown RBP6.18□□□□□ -1.42
SMG1-201ENST00000330588 POLR3KQ9Y2Y1 108 aaPredicted RBP6.18□□□□□ -1.42
SMG1-201ENST00000330588 COLEC10Q9Y6Z7 277 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 U3KQE9 123 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 APC2O95996 2303 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 ACACAQ13085 2346 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 UNC13CQ8NB66 2214 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 CHD8Q9HCK8 2581 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 TCRBV7S2A1N4TA0A589 114 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 OR5K3A6NET4 321 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 EIF4E1BA6NMX2 242 aaKnown RBP6.17□□□□□ -1.42
SMG1-201ENST00000330588 ZNF500O60304 480 aaPredicted RBP6.17□□□□□ -1.42
SMG1-201ENST00000330588 KDM1AO60341 852 aa6.17□□□□□ -1.42
SMG1-201ENST00000330588 FTH1P02794 183 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms