RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 K7ESM1 405 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 NPHS1O60500 1241 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 VPS4BO75351 444 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 C2P06681 752 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 PYGBP11216 843 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 BRAFP15056 766 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 GGT5P36269 586 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 B4GALNT1Q00973 533 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 HSPA14Q0VDF9 509 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 TBCCQ15814 346 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 NDUFA9Q16795 377 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 ZNF658BQ4V348 819 aaPredicted RBP5.04□□□□□ -1.6
LRIT3-201ENST00000327908 TCTE1Q5JU00 501 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 STPG1Q5TH74 334 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 CES3Q6UWW8 571 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 DENND6AQ8IWF6 608 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 FBXO39Q8N4B4 442 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 PPP1R14CQ8TAE6 165 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 PPP4R1Q8TF05 950 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 ZUFSPQ96AP4 578 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 PDXPQ96GD0 296 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 UBXN10Q96LJ8 280 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 CAMK1GQ96NX5 476 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 MYOCQ99972 504 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 C1QTNF3Q9BXJ4 246 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 ZMYND15Q9H091 742 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 C1GALT1Q9NS00 363 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 TMEM184CQ9NVA4 438 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 DNAJC11Q9NVH1 559 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 CD274Q9NZQ7 290 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 CRYL1Q9Y2S2 319 aa5.04□□□□□ -1.6
LRIT3-201ENST00000327908 MN1Q10571 1320 aaPredicted RBP5.03□□□□□ -1.6
LRIT3-201ENST00000327908 F5P12259 2224 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 A0A0J9YY10 115 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 TLDC2A0PJX2 215 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 MAP2K7O14733 419 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 GFRA3O60609 400 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 WISP3O95389 354 aaPredicted RBP5.03□□□□□ -1.6
LRIT3-201ENST00000327908 IGHEP01854 428 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 FAM153BP0C7A2 387 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 NEFHP12036 1026 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 CTSCP53634 463 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 PCBP2Q15366 365 aaKnown RBP eCLIP5.03□□□□□ -1.6
LRIT3-201ENST00000327908 SMU1Q2TAY7 513 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 FAM153CQ494X1 144 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 ZYG11AQ6WRX3 759 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 RD3Q7Z3Z2 195 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 C11orf96Q7Z7L8 435 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 PIP4P1Q86T03 277 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 C17orf64Q86WR6 236 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 SLC22A18ASQ8N1D0 253 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 TTC29Q8NA56 475 aaPredicted RBP5.03□□□□□ -1.6
LRIT3-201ENST00000327908 OR4D9Q8NGE8 314 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 RHBDD1Q8TEB9 315 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 TSACCQ96A04 125 aaPredicted RBP5.03□□□□□ -1.6
LRIT3-201ENST00000327908 SGF29Q96ES7 293 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 SH3GL2Q99962 352 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 AIF1LQ9BQI0 150 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 ENAMQ9NRM1 1142 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 C2orf42Q9NWW7 574 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 AHSPQ9NZD4 102 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 TMPRSS11EQ9UL52 423 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 MTO1Q9Y2Z2 717 aaKnown RBP5.03□□□□□ -1.6
LRIT3-201ENST00000327908 PCDH15Q96QU1 1955 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 OR51F1A6NGY5 319 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 SUPT3HB4E1H0 165 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 BTN3A1O00481 513 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 YY2O15391 372 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 KLK8O60259 260 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 NIPSNAP2O75323 286 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 SUPT3HO75486 399 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 C1orf105O95561 183 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 OTCP00480 354 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 CCDC166P0CW27 439 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 GFAPP14136 432 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 CD1DP15813 335 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 CCKBRP32239 447 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 CCR7P32248 378 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 ZNF844Q08AG5 666 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 BIKQ13323 160 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 OLIG2Q13516 323 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 MAP7Q14244 749 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 PUM1Q14671 1186 aaKnown RBP eCLIP5.03□□□□□ -1.6
LRIT3-201ENST00000327908 GGTA1PQ4G0N0 100 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 RBM44Q6ZP01 1051 aaKnown RBP5.03□□□□□ -1.6
LRIT3-201ENST00000327908 CAPN12Q6ZSI9 719 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 CLEC14AQ86T13 490 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 AMIGO1Q86WK6 493 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 TMPRSS12Q86WS5 348 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 ARL14Q8N4G2 192 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 RSC1A1Q92681 617 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 CCDC97Q96F63 343 aaPredicted RBP5.03□□□□□ -1.6
LRIT3-201ENST00000327908 CNDP1Q96KN2 507 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 ZNF778Q96MU6 729 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 GFM1Q96RP9 751 aaKnown RBP5.03□□□□□ -1.6
LRIT3-201ENST00000327908 WDR83Q9BRX9 315 aaKnown RBP5.03□□□□□ -1.6
LRIT3-201ENST00000327908 ARL15Q9NXU5 204 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 EURLQ9NYK6 297 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 SEMA5BQ9P283 1151 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 OPTCQ9UBM4 332 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms