RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 OR2L2Q8NH16 312 aa18.33■□□□□ 0.52
EXOSC3-201ENST00000327304 FAM174AQ8TBP5 190 aa18.33■□□□□ 0.52
EXOSC3-201ENST00000327304 BTBD10Q9BSF8 475 aa18.33■□□□□ 0.52
EXOSC3-201ENST00000327304 NUF2Q9BZD4 464 aa18.33■□□□□ 0.52
EXOSC3-201ENST00000327304 PLEKHM1Q9Y4G2 1056 aa18.33■□□□□ 0.52
EXOSC3-201ENST00000327304 SPTY2D1-AS1A0A0U1RR47 76 aa18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 MGAT4DA6NG13 374 aa18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 EIF3FO00303 357 aaPredicted RBP18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 TNFRSF10CO14798 259 aa18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 GPC4O75487 556 aa18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 FGF4P08620 206 aa18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 RPS17P08708 135 aaKnown RBP18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 CBSLP0DN79 551 aa18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 ACP5P13686 325 aa18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 CBSP35520 551 aa18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 SRP54P61011 504 aaKnown RBP18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 ELF3P78545 371 aaPredicted RBP18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 UBAP2LQ14157 1087 aaKnown RBP18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 FZD2Q14332 565 aa18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 NFE2L1Q14494 772 aa18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 SYTL3Q4VX76 610 aa18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 ANKS6Q68DC2 871 aa18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 CEP68Q76N32 757 aa18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 CHST15Q7LFX5 561 aaPredicted RBP18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 RD3Q7Z3Z2 195 aa18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 AMZ2Q86W34 360 aa18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 MYO1HQ8N1T3 1032 aa18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 OR52B2Q96RD2 323 aa18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 NUDT4Q9NZJ9 180 aa18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 GPSM3Q9Y4H4 160 aa18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 SPAG17Q6Q759 2223 aa18.32■□□□□ 0.52
EXOSC3-201ENST00000327304 LRP4O75096 1905 aa18.31■□□□□ 0.52
EXOSC3-201ENST00000327304 TNRC6BQ9UPQ9 1833 aaKnown RBP18.31■□□□□ 0.52
EXOSC3-201ENST00000327304 SLC5A10A0PJK1 596 aa18.31■□□□□ 0.52
EXOSC3-201ENST00000327304 PRR33A8MZF0 331 aa18.31■□□□□ 0.52
EXOSC3-201ENST00000327304 UBFD1O14562 309 aaKnown RBP18.31■□□□□ 0.52
EXOSC3-201ENST00000327304 KPNA5O15131 536 aa18.31■□□□□ 0.52
EXOSC3-201ENST00000327304 ENO1P06733 434 aaKnown RBP18.31■□□□□ 0.52
EXOSC3-201ENST00000327304 KRT16P08779 473 aa18.31■□□□□ 0.52
EXOSC3-201ENST00000327304 NCF2P19878 526 aaPredicted RBP18.31■□□□□ 0.52
EXOSC3-201ENST00000327304 INHBCP55103 352 aa18.31■□□□□ 0.52
EXOSC3-201ENST00000327304 EIF2B5Q13144 721 aaKnown RBP18.31■□□□□ 0.52
EXOSC3-201ENST00000327304 PTK2BQ14289 1009 aa18.31■□□□□ 0.52
EXOSC3-201ENST00000327304 TGFBIQ15582 683 aa18.31■□□□□ 0.52
EXOSC3-201ENST00000327304 LSM12Q3MHD2 195 aaKnown RBP18.31■□□□□ 0.52
EXOSC3-201ENST00000327304 IQCHQ86VS3 1027 aa18.31■□□□□ 0.52
EXOSC3-201ENST00000327304 CFAP206Q8IYR0 622 aa18.31■□□□□ 0.52
EXOSC3-201ENST00000327304 HM13Q8TCT9 377 aa18.31■□□□□ 0.52
EXOSC3-201ENST00000327304 ASZ1Q8WWH4 475 aa18.31■□□□□ 0.52
EXOSC3-201ENST00000327304 OR2M4Q96R27 311 aa18.31■□□□□ 0.52
EXOSC3-201ENST00000327304 TBC1D10AQ9BXI6 508 aa18.31■□□□□ 0.52
EXOSC3-201ENST00000327304 TRAF6Q9Y4K3 522 aa18.31■□□□□ 0.52
EXOSC3-201ENST00000327304 KNL1Q8NG31 2342 aa18.31■□□□□ 0.52
EXOSC3-201ENST00000327304 TLR4O00206 839 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 SLC22A2O15244 555 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 BCAT2O15382 392 aaPredicted RBP18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 GALR2O43603 387 aaPredicted RBP18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 SNX2O60749 519 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 SIX3O95343 332 aaPredicted RBP18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 GSTM1P09488 218 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 EEF1DP29692 281 aaKnown RBP18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 ADSLP30566 484 aaPredicted RBP18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 CNR2P34972 360 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 GSTM4Q03013 218 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 PDCD2Q16342 344 aaPredicted RBP18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 ZNF542PQ5EBM4 170 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 CYB5D1Q6P9G0 228 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 RPS27LQ71UM5 84 aaKnown RBP18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 HID1Q8IV36 788 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 CLYBLQ8N0X4 340 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 TIMM29Q9BSF4 260 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 WDR55Q9H6Y2 383 aaPredicted RBP18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 MEAF6Q9HAF1 191 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 MRGBPQ9NV56 204 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 KLF15Q9UIH9 416 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 ST14Q9Y5Y6 855 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 DNMT3AQ9Y6K1 912 aaPredicted RBP18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 ZNF318Q5VUA4 2279 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 C17orf113A0A1B0GUU1 675 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 TMEM233B4DJY2 109 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 E9PBE3 544 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 LIN7AO14910 233 aaPredicted RBP18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 KLHL41O60662 606 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 SLCO2B1O94956 709 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 EPHA3P29320 983 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 PDHA2P29803 388 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 PRDX6P30041 224 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 CSNK1EP49674 416 aaKnown RBP18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 HK3P52790 923 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 CLCQ05315 142 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 TCEA2Q15560 299 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 FBXW10Q5XX13 1052 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 SBSNQ6UWP8 590 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 CYHR1Q6ZMK1 362 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 CPSF7Q8N684 471 aaKnown RBP18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 CEP70Q8NHQ1 597 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 GLMNQ92990 594 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 TMEM159Q96B96 161 aa18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 ZC3H10Q96K80 434 aaKnown RBP18.3■□□□□ 0.52
EXOSC3-201ENST00000327304 TCEAL2Q9H3H9 227 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms