RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 TAPBPO15533 448 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 VIMP08670 466 aaKnown RBP9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 MTHFD1P11586 935 aaKnown RBP9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 CTSKP43235 329 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 OCRLQ01968 901 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 SIM2Q14190 667 aaPredicted RBP9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 PCBP2Q15366 365 aaKnown RBP eCLIP9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 UNC50Q53HI1 259 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 CFAP157Q5JU67 520 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 METTL2BQ6P1Q9 378 aaKnown RBP9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 FRMD7Q6ZUT3 714 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 SYT12Q8IV01 421 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 TBC1D21Q8IYX1 336 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 LRRC34Q8IZ02 419 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 OR5AR1Q8NGP9 310 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 ATL1Q8WXF7 558 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 C7orf26Q96N11 449 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 PKP4Q99569 1192 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 DRC3Q9H069 523 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 GSTO2Q9H4Y5 243 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 ERVMER34-1Q9H9K5 563 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 THAP1Q9NVV9 213 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 HEBP2Q9Y5Z4 205 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 CACNA1EQ15878 2313 aa9.98□□□□□ -0.81
VIPAS39-201ENST00000327028 ZNF318Q5VUA4 2279 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 RRP9O43818 475 aaKnown RBP9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 SNUPNO95149 360 aaKnown RBP9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 SIX3O95343 332 aaPredicted RBP9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 CELA2BP08218 269 aaPredicted RBP9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 F3P13726 295 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 GGT5P36269 586 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 SLC1A6P48664 564 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 AGTR2P50052 363 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 ABCE1P61221 599 aaKnown RBP9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 HNRNPKP61978 463 aaKnown RBP eCLIP9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 CLCA4Q14CN2 919 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 TCEA2Q15560 299 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 RPE65Q16518 533 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 CCSMST1Q4G0I0 132 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 TTC23LQ6PF05 361 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 RABEPKQ7Z6M1 372 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 OR9A1PQ8NGU1 263 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 ZNF483Q8TF39 744 aaPredicted RBP9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 CNDP1Q96KN2 507 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 TRMOQ9BU70 441 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 EPN3Q9H201 632 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 MVB12BQ9H7P6 319 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 SLCO1B3Q9NPD5 702 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 TMEM74BQ9NUR3 256 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 IMP3Q9NV31 184 aaKnown RBP9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 PSD3Q9NYI0 1048 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 SCHIP1Q9P0W5 487 aaPredicted RBP9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 TAAR2Q9P1P5 351 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 PCTPQ9UKL6 214 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 LRRC14BA6NHZ5 514 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 ITM2AO43736 263 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 EDF1O60869 148 aaKnown RBP9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 EML2O95834 649 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 ARRB2P32121 409 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 SEC24CP53992 1094 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 ELOCQ15369 112 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 C18orf21Q32NC0 220 aaPredicted RBP9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 PRRT3Q5FWE3 981 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 ANKS6Q68DC2 871 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 DUS1LQ6P1R4 473 aaKnown RBP9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 FAM47EQ6ZV65 393 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 KLHDC8AQ8IYD2 350 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 PHC3Q8NDX5 983 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 PIGKQ92643 395 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 RAD51AP1Q96B01 352 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 COL25A1Q9BXS0 654 aaPredicted RBP9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 CD244Q9BZW8 370 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 CAAP1Q9H8G2 361 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 ACSS2Q9NR19 701 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 FGFR1OP2Q9NVK5 253 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 STOX2Q9P2F5 926 aaPredicted RBP9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 SPASTQ9UBP0 616 aa9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 CFAP20Q9Y6A4 193 aaKnown RBP9.97□□□□□ -0.81
VIPAS39-201ENST00000327028 KRT87PA6NCN2 255 aa9.96□□□□□ -0.81
VIPAS39-201ENST00000327028 OR52A4PA6NMU1 304 aa9.96□□□□□ -0.81
VIPAS39-201ENST00000327028 LYPLA1O75608 230 aaPredicted RBP9.96□□□□□ -0.81
VIPAS39-201ENST00000327028 SUPT7LO94864 414 aa9.96□□□□□ -0.81
VIPAS39-201ENST00000327028 SLC2A4P14672 509 aa9.96□□□□□ -0.81
VIPAS39-201ENST00000327028 DRD4P21917 467 aa9.96□□□□□ -0.81
VIPAS39-201ENST00000327028 NDUFS1P28331 727 aa9.96□□□□□ -0.81
VIPAS39-201ENST00000327028 SLC6A12P48065 614 aa9.96□□□□□ -0.81
VIPAS39-201ENST00000327028 HSPA7P48741 367 aa9.96□□□□□ -0.81
VIPAS39-201ENST00000327028 BNC1Q01954 994 aa9.96□□□□□ -0.81
VIPAS39-201ENST00000327028 GRB7Q14451 532 aa9.96□□□□□ -0.81
VIPAS39-201ENST00000327028 KIF19Q2TAC6 998 aa9.96□□□□□ -0.81
VIPAS39-201ENST00000327028 FBXO48Q5FWF7 155 aa9.96□□□□□ -0.81
VIPAS39-201ENST00000327028 LRRC70Q7Z2Q7 622 aa9.96□□□□□ -0.81
VIPAS39-201ENST00000327028 TAF8Q7Z7C8 310 aa9.96□□□□□ -0.81
VIPAS39-201ENST00000327028 SDR16C5Q8N3Y7 309 aa9.96□□□□□ -0.81
VIPAS39-201ENST00000327028 FERD3LQ96RJ6 166 aa9.96□□□□□ -0.81
VIPAS39-201ENST00000327028 SORT1Q99523 831 aa9.96□□□□□ -0.81
VIPAS39-201ENST00000327028 HGH1Q9BTY7 390 aa9.96□□□□□ -0.81
VIPAS39-201ENST00000327028 NSRP1Q9H0G5 558 aaKnown RBP9.96□□□□□ -0.81
VIPAS39-201ENST00000327028 SPATA7Q9P0W8 599 aa9.96□□□□□ -0.81
VIPAS39-201ENST00000327028 POLG2Q9UHN1 485 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms