RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 VPS37BQ9H9H4 285 aa13.76□□□□□ -0.21
RPP40-201ENST00000319533 ACTR10Q9NZ32 417 aa13.76□□□□□ -0.21
RPP40-201ENST00000319533 PADI2Q9Y2J8 665 aa13.76□□□□□ -0.21
RPP40-201ENST00000319533 FER1L5A0AVI2 2057 aa13.76□□□□□ -0.21
RPP40-201ENST00000319533 GOLGA6L9A6NEM1 432 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 A6NL46 340 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 KRT86O43790 486 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 ZNF189O75820 626 aaPredicted RBP13.75□□□□□ -0.21
RPP40-201ENST00000319533 FTCDO95954 541 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 CD63P08962 238 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 PVRP15151 417 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 AGXTP21549 392 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 PSMA3P25788 255 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 ACRV1P26436 265 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 CDKN1CP49918 316 aaPredicted RBP13.75□□□□□ -0.21
RPP40-201ENST00000319533 SOX8P57073 446 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 CCZ1BP86790 482 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 CCZ1P86791 482 aaPredicted RBP13.75□□□□□ -0.21
RPP40-201ENST00000319533 PRPSAP1Q14558 356 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 PLEKHN1Q494U1 663 aaPredicted RBP13.75□□□□□ -0.21
RPP40-201ENST00000319533 CRB2Q5IJ48 1285 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 RHBDD2Q6NTF9 364 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 SPESP1Q6UW49 350 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 MRGPREQ86SM8 312 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 CDKL3Q8IVW4 592 aaPredicted RBP13.75□□□□□ -0.21
RPP40-201ENST00000319533 ACTL9Q8TC94 416 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 TFGQ92734 400 aaPredicted RBP13.75□□□□□ -0.21
RPP40-201ENST00000319533 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.75□□□□□ -0.21
RPP40-201ENST00000319533 SNRNP40Q96DI7 357 aaKnown RBP13.75□□□□□ -0.21
RPP40-201ENST00000319533 TCTN2Q96GX1 697 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 SPATA13Q96N96 652 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 GBP5Q96PP8 586 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 PPP1R2P1Q96PQ5 205 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 BARD1Q99728 777 aaKnown RBP13.75□□□□□ -0.21
RPP40-201ENST00000319533 FAM60AQ9NP50 221 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 CASS4Q9NQ75 786 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 LUZP4Q9P127 313 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 ICKQ9UPZ9 632 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.75□□□□□ -0.21
RPP40-201ENST00000319533 AP1M2Q9Y6Q5 423 aa13.75□□□□□ -0.21
RPP40-201ENST00000319533 STK10O94804 968 aaKnown RBP13.74□□□□□ -0.21
RPP40-201ENST00000319533 AP2A2O94973 939 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 CBX6O95503 412 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 IGHEP01854 428 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 CBSLP0DN79 551 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 ACADLP28330 430 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 MC4RP32245 332 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 CBSP35520 551 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 EIF3EP60228 445 aaKnown RBP13.74□□□□□ -0.21
RPP40-201ENST00000319533 TMPRSS15P98073 1019 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 OTUD4Q01804 1114 aaKnown RBP13.74□□□□□ -0.21
RPP40-201ENST00000319533 MYBPC3Q14896 1274 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 ZIC1Q15915 447 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 DCAF10Q5QP82 559 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 ZNF449Q6P9G9 518 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 SERPINA9Q86WD7 417 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 GPR135Q8IZ08 494 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 IQCKQ8N0W5 287 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 C19orf47Q8N9M1 422 aaKnown RBP13.74□□□□□ -0.21
RPP40-201ENST00000319533 FLVCR1-AS1Q8TAF5 88 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 PROKR1Q8TCW9 393 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 ALG3Q92685 438 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 C19orf60Q96EN9 201 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 FER1L6-AS2Q96M78 137 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 OR2A14Q96R47 310 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 TBL1YQ9BQ87 522 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 SLC7A5P2Q9GIP4 190 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 XKR8Q9H6D3 395 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 RYDENQ9NUL5 291 aaKnown RBP13.74□□□□□ -0.21
RPP40-201ENST00000319533 NLE1Q9NVX2 485 aaPredicted RBP13.74□□□□□ -0.21
RPP40-201ENST00000319533 B3GNT3Q9Y2A9 372 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 PIKFYVEQ9Y2I7 2098 aa13.74□□□□□ -0.21
RPP40-201ENST00000319533 A0A0U1RQJ8 604 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 CCL22O00626 93 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 KCNN4O15554 427 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 HCRTR1O43613 425 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 KLHL41O60662 606 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 OR2B3O76000 313 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 LDLRP01130 860 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 TPBGLP0DKB5 382 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 RBP3P10745 1247 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 OTX2P32243 289 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 SHMT2P34897 504 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 PRKG2Q13237 762 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 KCTD11Q693B1 232 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 MRPL14Q6P1L8 145 aaKnown RBP13.73□□□□□ -0.21
RPP40-201ENST00000319533 DARS2Q6PI48 645 aaKnown RBP13.73□□□□□ -0.21
RPP40-201ENST00000319533 UNC5AQ6ZN44 842 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 MAMDC2Q7Z304 686 aaPredicted RBP13.73□□□□□ -0.21
RPP40-201ENST00000319533 LRRC8AQ8IWT6 810 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 CLDN19Q8N6F1 224 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 TTC13Q8NBP0 860 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 OR2Y1Q8NGV0 311 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 PRR7Q8TB68 274 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 UBE2Q2Q8WVN8 375 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 DNAJC1Q96KC8 554 aaKnown RBP13.73□□□□□ -0.21
RPP40-201ENST00000319533 HGH1Q9BTY7 390 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 SPRTNQ9H040 489 aaPredicted RBP13.73□□□□□ -0.21
RPP40-201ENST00000319533 KLHL25Q9H0H3 589 aa13.73□□□□□ -0.21
RPP40-201ENST00000319533 ZNF552Q9H707 407 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms