RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 PROKR1Q8TCW9 393 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 RAET1EQ8TD07 263 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 NUDT8Q8WV74 236 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 FCGR1BQ92637 280 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 KCNN1Q92952 543 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 PHF21AQ96BD5 680 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 YME1L1Q96TA2 773 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 ANKHQ9HCJ1 492 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 TCRBV5S2A0A599 114 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 AGAP5A6NIR3 686 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 CENPBD1B2RD01 187 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 PIRO00625 290 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 PRSS56P0CW18 603 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 HTR6P50406 440 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 YBX1P67809 324 aaKnown RBP12.79□□□□□ -0.36
TRIM35-201ENST00000305364 OLR1P78380 273 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 GTF2H2Q13888 395 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 CTF1Q16619 201 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 SDHAF4Q5VUM1 108 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 OVOS1Q6IE37 1185 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 GTF2H2CQ6P1K8 395 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 KLHL17Q6TDP4 642 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 FAM131AQ6UXB0 335 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 Q96MT0 163 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 TRNT1Q96Q11 434 aaKnown RBP12.79□□□□□ -0.36
TRIM35-201ENST00000305364 CRTAC1Q9NQ79 661 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 MKLN1Q9UL63 735 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 KCNH4Q9UQ05 1017 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 A0A1W2PQ72 361 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 ZSCAN5BA6NJL1 495 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 POMCP01189 267 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 MZF1P28698 734 aaPredicted RBP12.78□□□□□ -0.36
TRIM35-201ENST00000305364 KRT20P35900 424 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 PPP3CCP48454 512 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 MXD1Q05195 221 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 SOX4Q06945 474 aaPredicted RBP12.78□□□□□ -0.36
TRIM35-201ENST00000305364 FCHO2Q0JRZ9 810 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 VGLL4Q14135 290 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 GTDC1Q4AE62 458 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 SNAP47Q5SQN1 464 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 ZNF691Q5VV52 312 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 TRIM48Q8IWZ4 208 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 RHEBL1Q8TAI7 183 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 CDKN2AIPNLQ96HQ2 116 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 BCL7BQ9BQE9 202 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 TAS2R9Q9NYW1 312 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 SLC12A8A0AV02 714 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 LZTS3O60299 673 aaPredicted RBP12.78□□□□□ -0.36
TRIM35-201ENST00000305364 ALDH2P05091 517 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 MC4RP32245 332 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 ZNF33AQ06730 810 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.78□□□□□ -0.36
TRIM35-201ENST00000305364 QPRTQ15274 297 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 TMEM207Q6UWW9 146 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 RASAL3Q86YV0 1011 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 METTL4Q8N3J2 472 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 OR4F6Q8NGB9 312 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 EEF1AKMT1Q8WVE0 214 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 TXNDC15Q96J42 360 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 CNPPD1Q9BV87 410 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 SPEF1Q9Y4P9 236 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 UGT2A1Q9Y4X1 527 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 SHROOM3Q8TF72 1996 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 CXCL11O14625 94 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 IRAK2O43187 625 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 HIST1H2AGP0C0S8 130 aaPredicted RBP12.78□□□□□ -0.36
TRIM35-201ENST00000305364 HIST1H2ADP20671 130 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 TTPAP49638 278 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 TRIQKQ629K1 86 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 B3GNT8Q7Z7M8 397 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 ADAMTSL2Q86TH1 951 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 CIR1Q86X95 450 aaPredicted RBP12.78□□□□□ -0.36
TRIM35-201ENST00000305364 CELF2-AS1Q8N7Q2 184 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 OR8J3Q8NGG0 315 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 HIST1H2AHQ96KK5 128 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 HIST1H2AJQ99878 128 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 H2AFJQ9BTM1 129 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 SCUBE2Q9NQ36 999 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 SMPD4Q9NXE4 827 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 PCDHGB6Q9Y5F9 930 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 EVPLQ92817 2033 aa12.78□□□□□ -0.36
TRIM35-201ENST00000305364 LCHNA4D1U4 455 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 OR6C70A6NIJ9 312 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 SLC28A1O00337 649 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 IL6P05231 212 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 YES1P07947 543 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 DARSP14868 501 aaKnown RBP12.77□□□□□ -0.36
TRIM35-201ENST00000305364 PFKLP17858 780 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 FDXRP22570 491 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 TIE1P35590 1138 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 PRIM2P49643 509 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 TP53BP2Q13625 1128 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 PYDC2Q56P42 97 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 KIAA1614Q5VZ46 1190 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 ELMOD2Q8IZ81 293 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 TCAIMQ8N3R3 496 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 WDR36Q8NI36 951 aaKnown RBP12.77□□□□□ -0.36
TRIM35-201ENST00000305364 BRSK1Q8TDC3 778 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 LPPQ93052 612 aa12.77□□□□□ -0.36
TRIM35-201ENST00000305364 DERL2Q9GZP9 239 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms