RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 NETO1Q8TDF5 533 aa13.33□□□□□ -0.28
BCCIP-202ENST00000299130 FRS2Q8WU20 508 aa13.33□□□□□ -0.28
BCCIP-202ENST00000299130 FAM162AQ96A26 154 aa13.33□□□□□ -0.28
BCCIP-202ENST00000299130 CSF3RQ99062 836 aa13.33□□□□□ -0.28
BCCIP-202ENST00000299130 INPP5KQ9BT40 448 aa13.33□□□□□ -0.28
BCCIP-202ENST00000299130 OSBPL10Q9BXB5 764 aa13.33□□□□□ -0.28
BCCIP-202ENST00000299130 UGT2B28Q9BY64 529 aa13.33□□□□□ -0.28
BCCIP-202ENST00000299130 ACPTQ9BZG2 426 aa13.33□□□□□ -0.28
BCCIP-202ENST00000299130 LHPPQ9H008 270 aa13.33□□□□□ -0.28
BCCIP-202ENST00000299130 LATS2Q9NRM7 1088 aa13.33□□□□□ -0.28
BCCIP-202ENST00000299130 AFF4Q9UHB7 1163 aaKnown RBP13.33□□□□□ -0.28
BCCIP-202ENST00000299130 CRLS1Q9UJA2 301 aa13.33□□□□□ -0.28
BCCIP-202ENST00000299130 SCN5AQ14524 2016 aa13.32□□□□□ -0.28
BCCIP-202ENST00000299130 TRBV5-3A0A0A0MS03 114 aa13.32□□□□□ -0.28
BCCIP-202ENST00000299130 GLYATL1P3A0A0U1RQE8 302 aa13.32□□□□□ -0.28
BCCIP-202ENST00000299130 TRIM64BA6NI03 449 aa13.32□□□□□ -0.28
BCCIP-202ENST00000299130 SLC28A1O00337 649 aa13.32□□□□□ -0.28
BCCIP-202ENST00000299130 GMNNO75496 209 aa13.32□□□□□ -0.28
BCCIP-202ENST00000299130 MSH3P20585 1137 aa13.32□□□□□ -0.28
BCCIP-202ENST00000299130 ITGALP20701 1170 aa13.32□□□□□ -0.28
BCCIP-202ENST00000299130 PPP2R2BQ00005 443 aa13.32□□□□□ -0.28
BCCIP-202ENST00000299130 TXNDC8Q6A555 127 aa13.32□□□□□ -0.28
BCCIP-202ENST00000299130 ANKRD26P1Q6NSI1 321 aa13.32□□□□□ -0.28
BCCIP-202ENST00000299130 SPESP1Q6UW49 350 aa13.32□□□□□ -0.28
BCCIP-202ENST00000299130 ZNF783Q6ZMS7 281 aa13.32□□□□□ -0.28
BCCIP-202ENST00000299130 THAP5Q7Z6K1 395 aa13.32□□□□□ -0.28
BCCIP-202ENST00000299130 BPIFB6Q8NFQ5 453 aa13.32□□□□□ -0.28
BCCIP-202ENST00000299130 ZNF461Q8TAF7 563 aa13.32□□□□□ -0.28
BCCIP-202ENST00000299130 VOPP1Q96AW1 172 aa13.32□□□□□ -0.28
BCCIP-202ENST00000299130 PAIP1Q9H074 479 aaKnown RBP13.32□□□□□ -0.28
BCCIP-202ENST00000299130 ZNF334Q9HCZ1 680 aaPredicted RBP13.32□□□□□ -0.28
BCCIP-202ENST00000299130 DNAJB9Q9UBS3 223 aa13.32□□□□□ -0.28
BCCIP-202ENST00000299130 ABT1Q9ULW3 272 aaKnown RBP13.32□□□□□ -0.28
BCCIP-202ENST00000299130 INVSQ9Y283 1065 aa13.32□□□□□ -0.28
BCCIP-202ENST00000299130 TDRKHQ9Y2W6 561 aaKnown RBP13.32□□□□□ -0.28
BCCIP-202ENST00000299130 PIKFYVEQ9Y2I7 2098 aa13.32□□□□□ -0.28
BCCIP-202ENST00000299130 NPIPB15A6NHN6 443 aaPredicted RBP13.31□□□□□ -0.28
BCCIP-202ENST00000299130 GFRA2O00451 464 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 AXIN1O15169 862 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 ZNF821O75541 412 aaPredicted RBP13.31□□□□□ -0.28
BCCIP-202ENST00000299130 ABLIM3O94929 683 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 PDYNP01213 254 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 MYCLP1P12525 358 aaPredicted RBP13.31□□□□□ -0.28
BCCIP-202ENST00000299130 PFKLP17858 780 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 TACR1P25103 407 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 CDKN2CP42773 168 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 AP1S1P61966 158 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 BCL2L1Q07817 233 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 CACHD1Q5VU97 1274 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 KIAA1841Q6NSI8 718 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 PLPP6Q8IY26 295 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 MICU2Q8IYU8 434 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 CHDHQ8NE62 594 aaPredicted RBP13.31□□□□□ -0.28
BCCIP-202ENST00000299130 SNRNP27Q8WVK2 155 aaKnown RBP13.31□□□□□ -0.28
BCCIP-202ENST00000299130 USP7Q93009 1102 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 ACDQ96AP0 544 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 NTMT1Q9BV86 223 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 KAT8Q9H7Z6 458 aaKnown RBP13.31□□□□□ -0.28
BCCIP-202ENST00000299130 SERHLQ9NQF3 203 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 FBXO10Q9UK96 956 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 BACE2Q9Y5Z0 518 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 U3KQV3 271 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 SH3PXD2BA1X283 911 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 GNGT2O14610 69 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 CREG1O75629 220 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 SEC14L2O76054 403 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 IL6P05231 212 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 INHBBP09529 407 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 EBLN1P0CF75 366 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 EPB42P16452 691 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 TTKP33981 857 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 ALDH7A1P49419 539 aaKnown RBP13.31□□□□□ -0.28
BCCIP-202ENST00000299130 GZMMP51124 257 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 GRSF1Q12849 480 aaKnown RBP eCLIP13.31□□□□□ -0.28
BCCIP-202ENST00000299130 NFATC3Q12968 1075 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 KCNAB2Q13303 367 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 SLC14A1Q13336 389 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 MACC1Q6ZN28 852 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 ZNF551Q7Z340 670 aaPredicted RBP13.31□□□□□ -0.28
BCCIP-202ENST00000299130 DNAJB7Q7Z6W7 309 aaPredicted RBP13.31□□□□□ -0.28
BCCIP-202ENST00000299130 C8orf59Q8N0T1 100 aaPredicted RBP13.31□□□□□ -0.28
BCCIP-202ENST00000299130 SPARTQ8N0X7 666 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 DCAF4L2Q8NA75 395 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 HJURPQ8NCD3 748 aaPredicted RBP13.31□□□□□ -0.28
BCCIP-202ENST00000299130 UBTD2Q8WUN7 234 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 NCLNQ969V3 563 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 ULK4Q96C45 1275 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 ITCHQ96J02 903 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 C1orf109Q9NX04 203 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 VNN3Q9NY84 501 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 LMCD1Q9NZU5 365 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 TRPS1Q9UHF7 1281 aa13.31□□□□□ -0.28
BCCIP-202ENST00000299130 STK16O75716 305 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 SERPINA1P01009 418 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 JUNBP17275 347 aaPredicted RBP13.3□□□□□ -0.28
BCCIP-202ENST00000299130 NR4A1P22736 598 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 MLLT10P55197 1068 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 B4GALNT1Q00973 533 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 SP3Q02447 781 aa13.3□□□□□ -0.28
BCCIP-202ENST00000299130 CD47Q08722 323 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms