RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 FAM110CQ1W6H9 321 aa18.79■□□□□ 0.6
TRA2A-201ENST00000297071 TTLL9Q3SXZ7 439 aa18.79■□□□□ 0.6
TRA2A-201ENST00000297071 PAGE2BQ5JRK9 111 aa18.79■□□□□ 0.6
TRA2A-201ENST00000297071 UBE2UQ5VVX9 321 aa18.79■□□□□ 0.6
TRA2A-201ENST00000297071 RAP1GAP2Q684P5 730 aa18.79■□□□□ 0.6
TRA2A-201ENST00000297071 KDM4DQ6B0I6 523 aa18.79■□□□□ 0.6
TRA2A-201ENST00000297071 TTC23LQ6PF05 361 aa18.79■□□□□ 0.6
TRA2A-201ENST00000297071 CCDC80Q76M96 950 aa18.79■□□□□ 0.6
TRA2A-201ENST00000297071 TSPYL5Q86VY4 417 aaPredicted RBP18.79■□□□□ 0.6
TRA2A-201ENST00000297071 HS3ST5Q8IZT8 346 aa18.79■□□□□ 0.6
TRA2A-201ENST00000297071 FRS2Q8WU20 508 aa18.79■□□□□ 0.6
TRA2A-201ENST00000297071 GLMNQ92990 594 aa18.79■□□□□ 0.6
TRA2A-201ENST00000297071 C19orf43Q9BQ61 176 aa18.79■□□□□ 0.6
TRA2A-201ENST00000297071 CCDC90BQ9GZT6 254 aa18.79■□□□□ 0.6
TRA2A-201ENST00000297071 AP5M1Q9H0R1 490 aa18.79■□□□□ 0.6
TRA2A-201ENST00000297071 MOV10Q9HCE1 1003 aaKnown RBP18.79■□□□□ 0.6
TRA2A-201ENST00000297071 ERVK-18Q9QC07 812 aa18.79■□□□□ 0.6
TRA2A-201ENST00000297071 TRPS1Q9UHF7 1281 aa18.79■□□□□ 0.6
TRA2A-201ENST00000297071 SAMD4AQ9UPU9 718 aaKnown RBP18.79■□□□□ 0.6
TRA2A-201ENST00000297071 PLXNA4Q9HCM2 1894 aa18.78■□□□□ 0.6
TRA2A-201ENST00000297071 RGS10O43665 173 aa18.78■□□□□ 0.6
TRA2A-201ENST00000297071 NIPSNAP2O75323 286 aa18.78■□□□□ 0.6
TRA2A-201ENST00000297071 EIF2DP41214 584 aaKnown RBP18.78■□□□□ 0.6
TRA2A-201ENST00000297071 ARHGDIAP52565 204 aa18.78■□□□□ 0.6
TRA2A-201ENST00000297071 ABRAXAS2Q15018 415 aa18.78■□□□□ 0.6
TRA2A-201ENST00000297071 SNX20Q7Z614 316 aa18.78■□□□□ 0.6
TRA2A-201ENST00000297071 MILR1Q7Z6M3 343 aa18.78■□□□□ 0.6
TRA2A-201ENST00000297071 MDGA1Q8NFP4 955 aa18.78■□□□□ 0.6
TRA2A-201ENST00000297071 NDNFQ8TB73 568 aa18.78■□□□□ 0.6
TRA2A-201ENST00000297071 PPP1R13LQ8WUF5 828 aa18.78■□□□□ 0.6
TRA2A-201ENST00000297071 RPRD1AQ96P16 312 aaPredicted RBP18.78■□□□□ 0.6
TRA2A-201ENST00000297071 PITX2Q99697 317 aa18.78■□□□□ 0.6
TRA2A-201ENST00000297071 DSN1Q9H410 356 aa18.78■□□□□ 0.6
TRA2A-201ENST00000297071 SPC25Q9HBM1 224 aa18.78■□□□□ 0.6
TRA2A-201ENST00000297071 ACOT13Q9NPJ3 140 aa18.78■□□□□ 0.6
TRA2A-201ENST00000297071 NDRG4Q9ULP0 352 aaKnown RBP18.78■□□□□ 0.6
TRA2A-201ENST00000297071 PCDHB14Q9Y5E9 798 aa18.78■□□□□ 0.6
TRA2A-201ENST00000297071 AP1M2Q9Y6Q5 423 aa18.78■□□□□ 0.6
TRA2A-201ENST00000297071 INSIG1O15503 277 aa18.77■□□□□ 0.6
TRA2A-201ENST00000297071 UPK1BO75841 260 aa18.77■□□□□ 0.6
TRA2A-201ENST00000297071 SEC24AO95486 1093 aa18.77■□□□□ 0.6
TRA2A-201ENST00000297071 GSNP06396 782 aa18.77■□□□□ 0.6
TRA2A-201ENST00000297071 SLC2A4P14672 509 aa18.77■□□□□ 0.6
TRA2A-201ENST00000297071 HOXD9P28356 352 aaPredicted RBP18.77■□□□□ 0.6
TRA2A-201ENST00000297071 GNPDA1P46926 289 aa18.77■□□□□ 0.6
TRA2A-201ENST00000297071 FBXO48Q5FWF7 155 aa18.77■□□□□ 0.6
TRA2A-201ENST00000297071 SBSNQ6UWP8 590 aa18.77■□□□□ 0.6
TRA2A-201ENST00000297071 HPS1Q92902 700 aa18.77■□□□□ 0.6
TRA2A-201ENST00000297071 NTMT1Q9BV86 223 aa18.77■□□□□ 0.6
TRA2A-201ENST00000297071 SLC29A3Q9BZD2 475 aa18.77■□□□□ 0.6
TRA2A-201ENST00000297071 IKZF5Q9H5V7 419 aa18.77■□□□□ 0.6
TRA2A-201ENST00000297071 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.77■□□□□ 0.6
TRA2A-201ENST00000297071 H0Y626 953 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 OAZ2O95190 189 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 CCNDBP1O95273 360 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 TRIM16O95361 564 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 PRLP01236 227 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 RPS3P23396 243 aaKnown RBP eCLIP18.77■□□□□ 0.59
TRA2A-201ENST00000297071 SERPINB1P30740 379 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 MC4RP32245 332 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 GSSP48637 474 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 MASP1P48740 699 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 FCGRTP55899 365 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 MGAT3Q09327 533 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 SELENBP1Q13228 472 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 KRR1Q13601 381 aaKnown RBP18.77■□□□□ 0.59
TRA2A-201ENST00000297071 DSC3Q14574 896 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 KCNJ8Q15842 424 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 FAM174BQ3ZCQ3 159 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 PSAPL1Q6NUJ1 521 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 SCN4BQ8IWT1 228 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 TMEM132CQ8N3T6 1108 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 CNIH3Q8TBE1 160 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 LGALS12Q96DT0 336 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 FAM120BQ96EK7 910 aaKnown RBP18.77■□□□□ 0.59
TRA2A-201ENST00000297071 SLC10A4Q96EP9 437 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 MS4A4AQ96JQ5 239 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 YME1L1Q96TA2 773 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 NXF2Q9GZY0 626 aaKnown RBP18.77■□□□□ 0.59
TRA2A-201ENST00000297071 IPPKQ9H8X2 491 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 LTB4R2Q9NPC1 389 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 OARD1Q9Y530 152 aa18.77■□□□□ 0.59
TRA2A-201ENST00000297071 E5RI56 91 aa18.76■□□□□ 0.59
TRA2A-201ENST00000297071 NPIPB8E9PQR5 432 aa18.76■□□□□ 0.59
TRA2A-201ENST00000297071 PER2O15055 1255 aa18.76■□□□□ 0.59
TRA2A-201ENST00000297071 SERPINA1P01009 418 aa18.76■□□□□ 0.59
TRA2A-201ENST00000297071 PIRTP0C851 137 aa18.76■□□□□ 0.59
TRA2A-201ENST00000297071 PFKLP17858 780 aa18.76■□□□□ 0.59
TRA2A-201ENST00000297071 FPR1P21462 350 aa18.76■□□□□ 0.59
TRA2A-201ENST00000297071 CLK3P49761 638 aaKnown RBP18.76■□□□□ 0.59
TRA2A-201ENST00000297071 RPL38P63173 70 aaKnown RBP18.76■□□□□ 0.59
TRA2A-201ENST00000297071 PURAQ00577 322 aaKnown RBP18.76■□□□□ 0.59
TRA2A-201ENST00000297071 VAC14Q08AM6 782 aa18.76■□□□□ 0.59
TRA2A-201ENST00000297071 LAPTM5Q13571 262 aa18.76■□□□□ 0.59
TRA2A-201ENST00000297071 MAD2L1BPQ15013 274 aaPredicted RBP18.76■□□□□ 0.59
TRA2A-201ENST00000297071 VARS2Q5ST30 1063 aaKnown RBP18.76■□□□□ 0.59
TRA2A-201ENST00000297071 MLIPQ5VWP3 458 aa18.76■□□□□ 0.59
TRA2A-201ENST00000297071 CERS6Q6ZMG9 384 aa18.76■□□□□ 0.59
TRA2A-201ENST00000297071 ZDHHC21Q8IVQ6 265 aa18.76■□□□□ 0.59
TRA2A-201ENST00000297071 PIANPQ8IYJ0 282 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms