RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 RETP07949 1114 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 DCKP27707 260 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 SLC7A9P82251 487 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 ZXDBP98169 803 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 USP39Q53GS9 565 aaKnown RBP24.51■■□□□ 1.51
ROM1-201ENST00000278833 TMEM240Q5SV17 173 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 LRIF1Q5T3J3 769 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 FIBINQ8TAL6 211 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 ISOC1Q96CN7 298 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 TLR9Q9NR96 1032 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 C1orf109Q9NX04 203 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 KIAA1522Q9P206 1035 aaPredicted RBP24.51■■□□□ 1.51
ROM1-201ENST00000278833 DNAJB9Q9UBS3 223 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 KLHL33A6NCF5 533 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 PRRG1O14668 218 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 DFNA5O60443 496 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 SNAP29O95721 258 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 GUCA1CO95843 209 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 MAPKAPK3Q16644 382 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 MPPE1Q53F39 396 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 ZDHHC20Q5W0Z9 365 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 MSANTD1Q6ZTZ1 278 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 TPRG1Q6ZUI0 275 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 OTOP2Q7RTS6 562 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 MSRB3Q8IXL7 192 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 SVOPLQ8N434 492 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 ARL14EPQ8N8R7 260 aaPredicted RBP24.51■■□□□ 1.51
ROM1-201ENST00000278833 PJA1Q8NG27 643 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 OR2AP1Q8NGE2 309 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 MCCC1Q96RQ3 725 aaPredicted RBP24.51■■□□□ 1.51
ROM1-201ENST00000278833 TMEM9Q9P0T7 183 aa24.51■■□□□ 1.51
ROM1-201ENST00000278833 ERN1O75460 977 aaKnown RBP24.5■■□□□ 1.51
ROM1-201ENST00000278833 STK16O75716 305 aa24.5■■□□□ 1.51
ROM1-201ENST00000278833 KRT6AP02538 564 aa24.5■■□□□ 1.51
ROM1-201ENST00000278833 KRT6BP04259 564 aa24.5■■□□□ 1.51
ROM1-201ENST00000278833 PGRP06401 933 aa24.5■■□□□ 1.51
ROM1-201ENST00000278833 ANXA5P08758 320 aa24.5■■□□□ 1.51
ROM1-201ENST00000278833 JUNBP17275 347 aaPredicted RBP24.5■■□□□ 1.51
ROM1-201ENST00000278833 KRT6CP48668 564 aa24.5■■□□□ 1.51
ROM1-201ENST00000278833 DCTN2Q13561 401 aaKnown RBP24.5■■□□□ 1.51
ROM1-201ENST00000278833 MYBPC3Q14896 1274 aa24.5■■□□□ 1.51
ROM1-201ENST00000278833 CNKSR3Q6P9H4 555 aa24.5■■□□□ 1.51
ROM1-201ENST00000278833 TBPL2Q6SJ96 375 aa24.5■■□□□ 1.51
ROM1-201ENST00000278833 CALHM3Q86XJ0 350 aa24.5■■□□□ 1.51
ROM1-201ENST00000278833 CLDN19Q8N6F1 224 aa24.5■■□□□ 1.51
ROM1-201ENST00000278833 TMBIM1Q969X1 311 aa24.5■■□□□ 1.51
ROM1-201ENST00000278833 ULK4Q96C45 1275 aa24.5■■□□□ 1.51
ROM1-201ENST00000278833 AURKBQ96GD4 344 aaPredicted RBP24.5■■□□□ 1.51
ROM1-201ENST00000278833 HBEGFQ99075 208 aa24.5■■□□□ 1.51
ROM1-201ENST00000278833 KLQ9UEF7 1012 aa24.5■■□□□ 1.51
ROM1-201ENST00000278833 ZMYM5Q9UJ78 669 aa24.5■■□□□ 1.51
ROM1-201ENST00000278833 ZNF490Q9ULM2 529 aaPredicted RBP24.5■■□□□ 1.51
ROM1-201ENST00000278833 FGBP02675 491 aa24.49■■□□□ 1.51
ROM1-201ENST00000278833 THRBP10828 461 aa24.49■■□□□ 1.51
ROM1-201ENST00000278833 HOXB9P17482 250 aaPredicted RBP24.49■■□□□ 1.51
ROM1-201ENST00000278833 ITGB6P18564 788 aa24.49■■□□□ 1.51
ROM1-201ENST00000278833 LMAN2Q12907 356 aa24.49■■□□□ 1.51
ROM1-201ENST00000278833 BOP1Q14137 746 aaKnown RBP24.49■■□□□ 1.51
ROM1-201ENST00000278833 PTGR1Q14914 329 aa24.49■■□□□ 1.51
ROM1-201ENST00000278833 FAM174BQ3ZCQ3 159 aa24.49■■□□□ 1.51
ROM1-201ENST00000278833 PSRC1Q6PGN9 363 aaPredicted RBP24.49■■□□□ 1.51
ROM1-201ENST00000278833 RGL4Q8IZJ4 473 aa24.49■■□□□ 1.51
ROM1-201ENST00000278833 LIX1Q8N485 282 aa24.49■■□□□ 1.51
ROM1-201ENST00000278833 LMLNQ96KR4 655 aa24.49■■□□□ 1.51
ROM1-201ENST00000278833 RPL10LQ96L21 214 aaKnown RBP24.49■■□□□ 1.51
ROM1-201ENST00000278833 MAGEB10Q96LZ2 347 aaPredicted RBP24.49■■□□□ 1.51
ROM1-201ENST00000278833 ZNF558Q96NG5 402 aa24.49■■□□□ 1.51
ROM1-201ENST00000278833 HHIPQ96QV1 700 aa24.49■■□□□ 1.51
ROM1-201ENST00000278833 APOL5Q9BWW9 433 aa24.49■■□□□ 1.51
ROM1-201ENST00000278833 SLC32A1Q9H598 525 aa24.49■■□□□ 1.51
ROM1-201ENST00000278833 OCEL1Q9H607 264 aa24.49■■□□□ 1.51
ROM1-201ENST00000278833 CROCCQ5TZA2 2017 aa24.49■■□□□ 1.51
ROM1-201ENST00000278833 ELOVL7A1L3X0 281 aa24.49■■□□□ 1.51
ROM1-201ENST00000278833 CLDN9O95484 217 aa24.49■■□□□ 1.51
ROM1-201ENST00000278833 PRPS2P11908 318 aa24.49■■□□□ 1.51
ROM1-201ENST00000278833 GRSF1Q12849 480 aaKnown RBP eCLIP24.49■■□□□ 1.51
ROM1-201ENST00000278833 PLEKHG6Q3KR16 790 aa24.49■■□□□ 1.51
ROM1-201ENST00000278833 C9orf50Q5SZB4 431 aa24.49■■□□□ 1.51
ROM1-201ENST00000278833 CHRDL2Q6WN34 429 aa24.49■■□□□ 1.51
ROM1-201ENST00000278833 ZSWIM9Q86XI8 627 aa24.49■■□□□ 1.51
ROM1-201ENST00000278833 SLC22A17Q8WUG5 538 aa24.49■■□□□ 1.51
ROM1-201ENST00000278833 SLC25A37Q9NYZ2 338 aa24.49■■□□□ 1.51
ROM1-201ENST00000278833 PIKFYVEQ9Y2I7 2098 aa24.48■■□□□ 1.51
ROM1-201ENST00000278833 KCNE1BA0A087WTH5 132 aa24.48■■□□□ 1.51
ROM1-201ENST00000278833 A0A096LPI6 279 aa24.48■■□□□ 1.51
ROM1-201ENST00000278833 LOC730098B7Z3J9 87 aa24.48■■□□□ 1.51
ROM1-201ENST00000278833 C8GP07360 202 aa24.48■■□□□ 1.51
ROM1-201ENST00000278833 MPC1LP0DKB6 136 aa24.48■■□□□ 1.51
ROM1-201ENST00000278833 PFKLP17858 780 aa24.48■■□□□ 1.51
ROM1-201ENST00000278833 UGT1A1P22309 533 aa24.48■■□□□ 1.51
ROM1-201ENST00000278833 UGT1A4P22310 534 aa24.48■■□□□ 1.51
ROM1-201ENST00000278833 BMP8BP34820 402 aa24.48■■□□□ 1.51
ROM1-201ENST00000278833 UGT1A3P35503 534 aa24.48■■□□□ 1.51
ROM1-201ENST00000278833 UGT1A5P35504 534 aa24.48■■□□□ 1.51
ROM1-201ENST00000278833 CLDN8P56748 225 aa24.48■■□□□ 1.51
ROM1-201ENST00000278833 SP140Q13342 867 aa24.48■■□□□ 1.51
ROM1-201ENST00000278833 IMPG1Q17R60 797 aa24.48■■□□□ 1.51
ROM1-201ENST00000278833 HABP4Q5JVS0 413 aaKnown RBP24.48■■□□□ 1.51
ROM1-201ENST00000278833 SPANXN4Q5MJ08 99 aa24.48■■□□□ 1.51
ROM1-201ENST00000278833 ZNF773Q6PK81 442 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms