RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 SLC44A1Q8WWI5 657 aa17.84■□□□□ 0.45
SDF4-201ENST00000263741 TRIT1Q9H3H1 467 aaKnown RBP17.84■□□□□ 0.45
SDF4-201ENST00000263741 HEBP2Q9Y5Z4 205 aa17.84■□□□□ 0.45
SDF4-201ENST00000263741 LILRA5A6NI73 299 aa17.83■□□□□ 0.45
SDF4-201ENST00000263741 TPBGLP0DKB5 382 aa17.83■□□□□ 0.45
SDF4-201ENST00000263741 SPINK2P20155 84 aa17.83■□□□□ 0.45
SDF4-201ENST00000263741 SPRP35270 261 aaPredicted RBP17.83■□□□□ 0.45
SDF4-201ENST00000263741 GPR3P46089 330 aa17.83■□□□□ 0.45
SDF4-201ENST00000263741 SPIDRQ14159 915 aa17.83■□□□□ 0.45
SDF4-201ENST00000263741 UGT3A1Q6NUS8 523 aa17.83■□□□□ 0.45
SDF4-201ENST00000263741 AVL9Q8NBF6 648 aa17.83■□□□□ 0.45
SDF4-201ENST00000263741 OR10G6Q8NH81 332 aa17.83■□□□□ 0.45
SDF4-201ENST00000263741 OR5K2Q8NHB8 316 aa17.83■□□□□ 0.45
SDF4-201ENST00000263741 SH3KBP1Q96B97 665 aa17.83■□□□□ 0.45
SDF4-201ENST00000263741 ARL8AQ96BM9 186 aa17.83■□□□□ 0.45
SDF4-201ENST00000263741 COLEC10Q9Y6Z7 277 aa17.83■□□□□ 0.45
SDF4-201ENST00000263741 PCM1Q15154 2024 aa17.83■□□□□ 0.45
SDF4-201ENST00000263741 D6RAR5 112 aa17.83■□□□□ 0.44
SDF4-201ENST00000263741 HYAL3O43820 417 aaPredicted RBP17.83■□□□□ 0.44
SDF4-201ENST00000263741 UBXN7O94888 489 aa17.83■□□□□ 0.44
SDF4-201ENST00000263741 TSPAN12O95859 305 aa17.83■□□□□ 0.44
SDF4-201ENST00000263741 INHBAP08476 426 aa17.83■□□□□ 0.44
SDF4-201ENST00000263741 HOXB3P14651 431 aaPredicted RBP17.83■□□□□ 0.44
SDF4-201ENST00000263741 ZNF37AP17032 561 aaPredicted RBP17.83■□□□□ 0.44
SDF4-201ENST00000263741 GCAP28676 217 aa17.83■□□□□ 0.44
SDF4-201ENST00000263741 HSD17B3P37058 310 aa17.83■□□□□ 0.44
SDF4-201ENST00000263741 PDX1P52945 283 aa17.83■□□□□ 0.44
SDF4-201ENST00000263741 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.83■□□□□ 0.44
SDF4-201ENST00000263741 B3GNT8Q7Z7M8 397 aa17.83■□□□□ 0.44
SDF4-201ENST00000263741 SPATA6LQ8N4H0 392 aa17.83■□□□□ 0.44
SDF4-201ENST00000263741 ARFGAP2Q8N6H7 521 aa17.83■□□□□ 0.44
SDF4-201ENST00000263741 DCAKDQ8WVC6 231 aa17.83■□□□□ 0.44
SDF4-201ENST00000263741 ANKRD49Q8WVL7 239 aa17.83■□□□□ 0.44
SDF4-201ENST00000263741 AHCYL2Q96HN2 611 aaKnown RBP17.83■□□□□ 0.44
SDF4-201ENST00000263741 IL17FQ96PD4 163 aa17.83■□□□□ 0.44
SDF4-201ENST00000263741 GFM1Q96RP9 751 aaKnown RBP17.83■□□□□ 0.44
SDF4-201ENST00000263741 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.83■□□□□ 0.44
SDF4-201ENST00000263741 MVB12BQ9H7P6 319 aa17.83■□□□□ 0.44
SDF4-201ENST00000263741 IKZF3Q9UKT9 509 aa17.83■□□□□ 0.44
SDF4-201ENST00000263741 ICKQ9UPZ9 632 aa17.83■□□□□ 0.44
SDF4-201ENST00000263741 CEP295Q9C0D2 2601 aa17.82■□□□□ 0.44
SDF4-201ENST00000263741 ARHGEF33A8MVX0 844 aa17.82■□□□□ 0.44
SDF4-201ENST00000263741 NTN3O00634 580 aaPredicted RBP17.82■□□□□ 0.44
SDF4-201ENST00000263741 MATN4O95460 622 aa17.82■□□□□ 0.44
SDF4-201ENST00000263741 ATP5DP30049 168 aa17.82■□□□□ 0.44
SDF4-201ENST00000263741 CCT5P48643 541 aa17.82■□□□□ 0.44
SDF4-201ENST00000263741 SLC12A2P55011 1212 aa17.82■□□□□ 0.44
SDF4-201ENST00000263741 GFERP55789 205 aa17.82■□□□□ 0.44
SDF4-201ENST00000263741 UNC5DQ6UXZ4 953 aa17.82■□□□□ 0.44
SDF4-201ENST00000263741 TBC1D21Q8IYX1 336 aa17.82■□□□□ 0.44
SDF4-201ENST00000263741 OR4E2Q8NGC2 313 aa17.82■□□□□ 0.44
SDF4-201ENST00000263741 ADAMTS14Q8WXS8 1223 aa17.82■□□□□ 0.44
SDF4-201ENST00000263741 NCSTNQ92542 709 aa17.82■□□□□ 0.44
SDF4-201ENST00000263741 CTNNAL1Q9UBT7 734 aa17.82■□□□□ 0.44
SDF4-201ENST00000263741 KLHL3Q9UH77 587 aa17.82■□□□□ 0.44
SDF4-201ENST00000263741 ADAMTS6Q9UKP5 1117 aa17.82■□□□□ 0.44
SDF4-201ENST00000263741 DUX1O43812 170 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 C1orf105O95561 183 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 PROS1P07225 676 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 AMD1P17707 334 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 NR1D1P20393 614 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 SKIV2L2P42285 1042 aaKnown RBP17.81■□□□□ 0.44
SDF4-201ENST00000263741 MSH2P43246 934 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 POU4F1Q01851 419 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 GRB7Q14451 532 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 CYHR1Q6ZMK1 362 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 DCUN1D3Q8IWE4 304 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 C2orf73Q8N5S3 287 aaPredicted RBP17.81■□□□□ 0.44
SDF4-201ENST00000263741 OR2W6PQ8NHA6 318 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 LCN9Q8WX39 176 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 ATP6V1G3Q96LB4 118 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 UCK1Q9HA47 277 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 GPAMQ9HCL2 828 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 KLHL42Q9P2K6 505 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 SMIM23A6NLE4 172 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 ENO3P13929 434 aaPredicted RBP17.81■□□□□ 0.44
SDF4-201ENST00000263741 NDUFS1P28331 727 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 RGS4P49798 205 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 EPHA4P54764 986 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 E2F1Q01094 437 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 SNAP47Q5SQN1 464 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 RAB44Q7Z6P3 723 aaPredicted RBP17.81■□□□□ 0.44
SDF4-201ENST00000263741 TAX1BP1Q86VP1 789 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 RBM12BQ8IXT5 1001 aaKnown RBP17.81■□□□□ 0.44
SDF4-201ENST00000263741 DLG3Q92796 817 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 FOPNLQ96NB1 174 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 IKBKGQ9Y6K9 419 aa17.81■□□□□ 0.44
SDF4-201ENST00000263741 WDFY3Q8IZQ1 3526 aa17.8■□□□□ 0.44
SDF4-201ENST00000263741 OR6C74A6NCV1 312 aa17.8■□□□□ 0.44
SDF4-201ENST00000263741 CPNE6O95741 557 aa17.8■□□□□ 0.44
SDF4-201ENST00000263741 CBSLP0DN79 551 aa17.8■□□□□ 0.44
SDF4-201ENST00000263741 STMN1P16949 149 aa17.8■□□□□ 0.44
SDF4-201ENST00000263741 CD9P21926 228 aa17.8■□□□□ 0.44
SDF4-201ENST00000263741 CBSP35520 551 aa17.8■□□□□ 0.44
SDF4-201ENST00000263741 CAPZBP47756 277 aa17.8■□□□□ 0.44
SDF4-201ENST00000263741 IL2P60568 153 aa17.8■□□□□ 0.44
SDF4-201ENST00000263741 ZKSCAN8Q15776 578 aaPredicted RBP17.8■□□□□ 0.44
SDF4-201ENST00000263741 ZNF574Q6ZN55 896 aaPredicted RBP17.8■□□□□ 0.44
SDF4-201ENST00000263741 MYO1HQ8N1T3 1032 aa17.8■□□□□ 0.44
SDF4-201ENST00000263741 SEMA6CQ9H3T2 930 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms