RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 CCT8L2Q96SF2 557 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 KLHL42Q9P2K6 505 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 SLC6A14Q9UN76 642 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 CNTN6Q9UQ52 1028 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 TCEA3O75764 348 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 HLA-DQA2P01906 255 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 ITPKAP23677 461 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 TMEM115Q12893 351 aaPredicted RBP13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 CTBP1Q13363 440 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 ALFQ53S48 1182 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 SIRPB2Q5JXA9 342 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 CDKL4Q5MAI5 379 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 LAYNQ6UX15 382 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 FAR1Q8WVX9 515 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 TMEM234Q8WY98 164 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 NDRG1Q92597 394 aaKnown RBP13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 TIMM29Q9BSF4 260 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 SIX2Q9NPC8 291 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 HRASLS2Q9NWW9 162 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 GTF2A1LQ9UNN4 478 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 NOX1Q9Y5S8 564 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 CCT8L1PA6NM43 557 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 H0Y3Z8 333 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 ADGRD2Q7Z7M1 963 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 OAFQ86UD1 273 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 SLC5A11Q8WWX8 675 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 FIG4Q92562 907 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 CENPIQ92674 756 aaPredicted RBP13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 CPNE2Q96FN4 548 aaPredicted RBP13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 SEC16BQ96JE7 1060 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 BMFQ96LC9 184 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 NEUROD4Q9HD90 331 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 ZNF23P17027 643 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 GALK1P51570 392 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 CLCN7P51798 805 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 DLG1Q12959 904 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 RASGEF1AQ8N9B8 481 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 PTCD3Q96EY7 689 aaKnown RBP13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 PIH1D1Q9NWS0 290 aaKnown RBP13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 MFN2O95140 757 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 B3GNT9Q6UX72 402 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 TEX47Q8TBZ9 253 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 KCNJ9Q92806 393 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 SLCO2A1Q92959 643 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 ELMO3Q96BJ8 720 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 MTFMTQ96DP5 389 aaKnown RBP13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 SLC35G5Q96KT7 338 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 ZMAT2Q96NC0 199 aaKnown RBP13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 XYLT2Q9H1B5 865 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 C1orf109Q9NX04 203 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 WNT16Q9UBV4 365 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 DKKL1Q9UK85 242 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 TPRKBQ9Y3C4 175 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 TRAF6Q9Y4K3 522 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 NUMBLQ9Y6R0 609 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 TRBV23OR9-2A0A075B6M9 112 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 RPSAP08865 295 aaKnown RBP13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 UGT1A4P22310 534 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 UGT1A3P35503 534 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 CLCN4P51793 760 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 TAS2R41P59536 307 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 TLDC1Q6P9B6 456 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 ADGRG6Q86SQ4 1221 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 TDRPQ86YL5 185 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 PLPP6Q8IY26 295 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 KCNN1Q92952 543 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 TMCO6Q96DC7 493 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 CD180Q99467 661 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 MCMBPQ9BTE3 642 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 PSMD13Q9UNM6 376 aa13.15□□□□□ -0.3
PRPF38A-201ENST00000257181 SNAP91O60641 907 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 FOXK1P85037 733 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 TNK2Q07912 1038 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 MRPL49Q13405 166 aaKnown RBP13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 METTL21CQ5VZV1 264 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 CEACAM20Q6UY09 585 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 APLFQ8IW19 511 aaPredicted RBP13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 NOD2Q9HC29 1040 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 NCEH1Q6PIU2 408 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 CREG2Q8IUH2 290 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 CACTIN-AS1Q8N1I8 211 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 CYGBQ8WWM9 190 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 C19orf60Q96EN9 201 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 OR52E6Q96RD3 313 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 G6PC3Q9BUM1 346 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 ACAT2Q9BWD1 397 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 IFT80Q9P2H3 777 aaPredicted RBP13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 SUV39H1O43463 412 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 GPRC6AQ5T6X5 926 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 MLIPQ5VWP3 458 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 METTL2BQ6P1Q9 378 aaKnown RBP13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 ZC3H7AQ8IWR0 971 aaKnown RBP13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 GAL3ST4Q96RP7 486 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 COQ6Q9Y2Z9 468 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 TCRBV9S1A1TA0A576 114 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 PABPC4LP0CB38 370 aaKnown RBP13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 CLCQ05315 142 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 CYTH1Q15438 398 aa13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 YOD1Q5VVQ6 348 aaPredicted RBP13.14□□□□□ -0.31
PRPF38A-201ENST00000257181 IYDQ6PHW0 289 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms