RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 FAM149AA5PLN7 773 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 DCLK1O15075 740 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 KERAO60938 352 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 CHRNGP07510 517 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 MYL9P24844 172 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 HNMTP50135 292 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 C17orf99Q6UX52 265 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 NDC1Q9BTX1 674 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 SPHK2Q9NRA0 654 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 PDE4DIPQ5VU43 2346 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 HEPACAM2A8MVW5 462 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 KPNA4O00629 521 aaPredicted RBP18.1■□□□□ 0.49
CLIP2-201ENST00000223398 ZBTB46Q86UZ6 589 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 SAMD11Q96NU1 681 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 GPER1Q99527 375 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 CDC7O00311 574 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 ECI2O75521 394 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 LEFTY1O75610 366 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 BEST1O76090 585 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 PRPS2P11908 318 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 HOXD13P35453 343 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 PSMD4P55036 377 aaKnown RBP18.1■□□□□ 0.49
CLIP2-201ENST00000223398 RTP2Q5QGT7 225 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 SMARCD3Q6STE5 483 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 TSPAN14Q8NG11 270 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 NAT14Q8WUY8 206 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 LENG8Q96PV6 779 aaPredicted RBP18.1■□□□□ 0.49
CLIP2-201ENST00000223398 TESMINQ9Y4I5 508 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 A0A1W2PP55 124 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 DYTNA2CJ06 578 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 PGM3O95394 542 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 CA3P07451 260 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 CLCN7P51798 805 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 CHN2P52757 468 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 RPL6Q02878 288 aaKnown RBP18.1■□□□□ 0.49
CLIP2-201ENST00000223398 PDK3Q15120 406 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 DCST1Q5T197 706 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 NAIF1Q69YI7 327 aaPredicted RBP18.1■□□□□ 0.49
CLIP2-201ENST00000223398 GHDCQ8N2G8 530 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 OR7A2PQ8NGA2 310 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 OR10T2Q8NGX3 314 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 RNF31Q96EP0 1072 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 C7orf26Q96N11 449 aa18.1■□□□□ 0.49
CLIP2-201ENST00000223398 A8MUI8 341 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 MFSD5Q6N075 450 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 SLC35B2Q8TB61 432 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 DUSP26Q9BV47 211 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 GRHL1Q9NZI5 618 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 MAGEB3O15480 346 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 CYBAP13498 195 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 C4BPBP20851 252 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 VIPR2P41587 438 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 OMPP47874 163 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 PREPP48147 710 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 CDH12P55289 794 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 INCA1Q0VD86 236 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 PEG10Q86TG7 708 aaKnown RBP18.09■□□□□ 0.49
CLIP2-201ENST00000223398 LPGAT1Q92604 370 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 ZBED6CLQ96FA7 236 aaPredicted RBP18.09■□□□□ 0.49
CLIP2-201ENST00000223398 TFB2MQ9H5Q4 396 aaKnown RBP18.09■□□□□ 0.49
CLIP2-201ENST00000223398 DNAAF2Q9NVR5 837 aaKnown RBP18.09■□□□□ 0.49
CLIP2-201ENST00000223398 SGCBQ16585 318 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 KLHL24Q6TFL4 600 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 Q6ZVL8 140 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 NPY6RQ99463 290 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 SH3GL2Q99962 352 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 ADH1BP00325 375 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 CYP11A1P05108 521 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 NR2F6P10588 404 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 SLC25A11Q02978 314 aaKnown RBP18.09■□□□□ 0.49
CLIP2-201ENST00000223398 CCINQ13939 588 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 RANBP3LQ86VV4 465 aaPredicted RBP18.09■□□□□ 0.49
CLIP2-201ENST00000223398 SLC38A4Q969I6 547 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 NEUROD4Q9HD90 331 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 TMEM248Q9NWD8 314 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 CLEC4AQ9UMR7 237 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 CDC14AQ9UNH5 594 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 WWP2O00308 870 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 LIN7AO14910 233 aaPredicted RBP18.09■□□□□ 0.49
CLIP2-201ENST00000223398 B4GALT2O60909 372 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 MYCLP1P12525 358 aaPredicted RBP18.09■□□□□ 0.49
CLIP2-201ENST00000223398 HSD17B2P37059 387 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 ARHGAP40Q5TG30 622 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 CXXC5Q7LFL8 322 aaKnown RBP18.09■□□□□ 0.49
CLIP2-201ENST00000223398 NUDT13Q86X67 352 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 TBC1D21Q8IYX1 336 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 PIK3C3Q8NEB9 887 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 OR5M3Q8NGP4 307 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 SUN3Q8TAQ9 357 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 GTPBP3Q969Y2 492 aaKnown RBP18.09■□□□□ 0.49
CLIP2-201ENST00000223398 HSD3B7Q9H2F3 369 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 NCDNQ9UBB6 729 aa18.09■□□□□ 0.49
CLIP2-201ENST00000223398 MEIS3P2A8K0S8 358 aa18.08■□□□□ 0.49
CLIP2-201ENST00000223398 GDF5P43026 501 aa18.08■□□□□ 0.49
CLIP2-201ENST00000223398 RAB8AP61006 207 aa18.08■□□□□ 0.49
CLIP2-201ENST00000223398 PLGLB1Q02325 96 aa18.08■□□□□ 0.49
CLIP2-201ENST00000223398 CLNKQ7Z7G1 428 aa18.08■□□□□ 0.49
CLIP2-201ENST00000223398 CMTR2Q8IYT2 770 aaKnown RBP18.08■□□□□ 0.49
CLIP2-201ENST00000223398 SORCS1Q8WY21 1168 aa18.08■□□□□ 0.49
CLIP2-201ENST00000223398 PIGKQ92643 395 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms