RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 SLC10A7Q0GE19 358 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 C8orf59Q8N0T1 100 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 FAM160A2Q8N612 972 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 OR2L2Q8NH16 312 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 NCSTNQ92542 709 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 ZNF700Q9H0M5 742 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 A0A075B6Q4 140 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 KLRC4-KLRK1H3BQV0 150 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 C8GP07360 202 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 GGT2P36268 569 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 TNK2Q07912 1038 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 BRIX1Q8TDN6 353 aaKnown RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 ZFP90Q8TF47 636 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 ASB15Q8WXK1 588 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 TOP1MTQ969P6 601 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 DEFB126Q9BYW3 111 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 ZNF226Q9NYT6 803 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 FAM205CA6NFA0 338 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CD3GP09693 182 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CHRM1P11229 460 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 F2RP25116 425 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 MAT2AP31153 395 aaKnown RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 CORO7P57737 925 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 ESPNLQ6ZVH7 1005 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 UNC93AQ86WB7 457 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CREG2Q8IUH2 290 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 TNFAIP8L1Q8WVP5 186 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 HINT2Q9BX68 163 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 ADAM28Q9UKQ2 775 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 GABRR3A8MPY1 467 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 FKBP6O75344 327 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 ANGPTL1O95841 491 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 LTA4HP09960 611 aaKnown RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 PRKCHP24723 683 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 RBM20Q5T481 1227 aaKnown RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 CXorf57Q6NSI4 855 aaKnown RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 LYPD8Q6UX82 237 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 C19orf35Q6ZS72 473 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CYB5R4Q7L1T6 521 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CLEC1AQ8NC01 280 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 HNRNPABQ99729 332 aaKnown RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 EPB41L4AQ9HCS5 686 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 TBCCD1Q9NVR7 557 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 PARPBPQ9NWS1 579 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 ZMYM4Q5VZL5 1548 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 ZNF891A8MT65 544 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 SCAMP1O15126 338 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 SIAH2O43255 324 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 POP4O95707 220 aaKnown RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 EPCAMP16422 314 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 SCNN1GP51170 649 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 NSDHLQ15738 373 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 TIGD2Q4W5G0 525 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 DAZAP1Q96EP5 407 aaKnown RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 MMADHCQ9H3L0 296 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 DCLRE1BQ9H816 532 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 SLC39A9Q9NUM3 307 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 AGO1Q9UL18 857 aaKnown RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 RBM47A0AV96 593 aaKnown RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 OR5K4A6NMS3 321 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 ZNF670-ZNF695F2Z2N8 137 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CREBL2O60519 120 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 RAD51DO75771 328 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 ADSSP30520 456 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 ZNF543Q08ER8 600 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 PRAMEF17Q5VTA0 474 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 IQCHQ86VS3 1027 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 KYQ8NBH2 561 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 GLYATL1Q969I3 302 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 RNF145Q96MT1 663 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 ZNF184Q99676 751 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 TMEM2Q9UHN6 1383 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 PLOD3O60568 738 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CPNE3O75131 537 aaKnown RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 ZNF217O75362 1048 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 USP2O75604 605 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 WDPCPO95876 746 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 FAM228BP0C875 321 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 MPIP34949 423 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 VHLP40337 213 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 EIF2B2P49770 351 aaKnown RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 CRYBB1P53674 252 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 OLR1P78380 273 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 SLC16A9Q7RTY1 509 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 GPR155Q7Z3F1 870 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 NET1Q7Z628 596 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 COL23A1Q86Y22 540 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 OR4N5Q8IXE1 308 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 DNAJB14Q8TBM8 379 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 SLC39A7Q92504 469 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 NUS1Q96E22 293 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 PANX1Q96RD7 426 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 LEF1Q9UJU2 399 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 MED14O60244 1454 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 UROSP10746 265 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 KCNA3P22001 575 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 GNB2P62879 340 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CBLBQ13191 982 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 RFX4Q33E94 735 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms