RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 RPL14P50914 215 aaKnown RBP11.49□□□□□ -0.57
CLN6-223ENST00000637823 CLCNKAP51800 687 aa11.49□□□□□ -0.57
CLN6-223ENST00000637823 SRP54P61011 504 aaKnown RBP11.49□□□□□ -0.57
CLN6-223ENST00000637823 RPL6Q02878 288 aaKnown RBP11.49□□□□□ -0.57
CLN6-223ENST00000637823 ATG14Q6ZNE5 492 aa11.49□□□□□ -0.57
CLN6-223ENST00000637823 PDZD3Q86UT5 571 aa11.49□□□□□ -0.57
CLN6-223ENST00000637823 WDR75Q8IWA0 830 aaKnown RBP11.49□□□□□ -0.57
CLN6-223ENST00000637823 ANKS4BQ8N8V4 417 aa11.49□□□□□ -0.57
CLN6-223ENST00000637823 MAGEC3Q8TD91 643 aa11.49□□□□□ -0.57
CLN6-223ENST00000637823 ATL1Q8WXF7 558 aa11.49□□□□□ -0.57
CLN6-223ENST00000637823 FBXL8Q96CD0 374 aa11.49□□□□□ -0.57
CLN6-223ENST00000637823 KLHDC7BQ96G42 594 aa11.49□□□□□ -0.57
CLN6-223ENST00000637823 OR2M4Q96R27 311 aa11.49□□□□□ -0.57
CLN6-223ENST00000637823 SIKE1Q9BRV8 207 aa11.49□□□□□ -0.57
CLN6-223ENST00000637823 CD244Q9BZW8 370 aa11.49□□□□□ -0.57
CLN6-223ENST00000637823 ZDHHC5Q9C0B5 715 aa11.49□□□□□ -0.57
CLN6-223ENST00000637823 CARS2Q9HA77 564 aaKnown RBP11.49□□□□□ -0.57
CLN6-223ENST00000637823 MRPL40Q9NQ50 206 aaKnown RBP11.49□□□□□ -0.57
CLN6-223ENST00000637823 PNPOQ9NVS9 261 aa11.49□□□□□ -0.57
CLN6-223ENST00000637823 KLQ9UEF7 1012 aa11.49□□□□□ -0.57
CLN6-223ENST00000637823 VTI1BQ9UEU0 232 aa11.49□□□□□ -0.57
CLN6-223ENST00000637823 PCTPQ9UKL6 214 aa11.49□□□□□ -0.57
CLN6-223ENST00000637823 GON4LQ3T8J9 2241 aa11.49□□□□□ -0.57
CLN6-223ENST00000637823 ARHGEF17Q96PE2 2063 aaPredicted RBP11.48□□□□□ -0.57
CLN6-223ENST00000637823 ARHGEF33A8MVX0 844 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 IFRD1O00458 451 aaPredicted RBP11.48□□□□□ -0.57
CLN6-223ENST00000637823 C1orf105O95561 183 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 MLYCDO95822 493 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 TNFP01375 233 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 RPN2P04844 631 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 SLC35G4P0C7Q5 338 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 KITP10721 976 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 CCR10P46092 362 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 CLCQ05315 142 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 LRP8Q14114 963 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 TPRG1LQ5T0D9 272 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 CAPRIN2Q6IMN6 1127 aaKnown RBP11.48□□□□□ -0.57
CLN6-223ENST00000637823 RPS27LQ71UM5 84 aaKnown RBP11.48□□□□□ -0.57
CLN6-223ENST00000637823 IQCHQ86VS3 1027 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 WDR5BQ86VZ2 330 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 AFAP1L2Q8N4X5 818 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 ZNF781Q8N8C0 355 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 MFSD2AQ8NA29 543 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 OR13H1Q8NG92 308 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 RFWD2Q8NHY2 731 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 TSACCQ96A04 125 aaPredicted RBP11.48□□□□□ -0.57
CLN6-223ENST00000637823 THOC1Q96FV9 657 aaKnown RBP11.48□□□□□ -0.57
CLN6-223ENST00000637823 FAR2Q96K12 515 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 HGH1Q9BTY7 390 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 WWP1Q9H0M0 922 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 DUSP15Q9H1R2 295 aaPredicted RBP11.48□□□□□ -0.57
CLN6-223ENST00000637823 KCNK13Q9HB14 408 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 PRMT8Q9NR22 394 aaPredicted RBP11.48□□□□□ -0.57
CLN6-223ENST00000637823 AASDHPPTQ9NRN7 309 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 GPR27Q9NS67 375 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 KCNK4Q9NYG8 393 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 WWOXQ9NZC7 414 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 EIF2B4Q9UI10 523 aaKnown RBP11.48□□□□□ -0.57
CLN6-223ENST00000637823 ZDHHC2Q9UIJ5 367 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 STK38LQ9Y2H1 464 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 USH1CQ9Y6N9 552 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 DGKBQ9Y6T7 804 aa11.48□□□□□ -0.57
CLN6-223ENST00000637823 TP53BP1Q12888 1972 aaPredicted RBP11.48□□□□□ -0.57
CLN6-223ENST00000637823 SPAG17Q6Q759 2223 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 SPTY2D1-AS1A0A0U1RR47 76 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 MEI4A8MW99 385 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 K7EPI3 171 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 E2F3O00716 465 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 LAMTOR5O43504 91 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 STK16O75716 305 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 FGF4P08620 206 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 THEGLP0DJG4 465 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 ALOX15P16050 662 aaPredicted RBP11.47□□□□□ -0.57
CLN6-223ENST00000637823 MPSTP25325 297 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 CD38P28907 300 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 PIK3CGP48736 1102 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 HSPA7P48741 367 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 ARFIP2P53365 341 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 CDH13P55290 713 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 PKNOX1P55347 436 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 RACK1P63244 317 aaKnown RBP11.47□□□□□ -0.57
CLN6-223ENST00000637823 DMWDQ09019 674 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 SF3A3Q12874 501 aaKnown RBP eCLIP11.47□□□□□ -0.57
CLN6-223ENST00000637823 LCP2Q13094 533 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 GTF2H2Q13888 395 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 ALG11Q2TAA5 492 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 C18orf21Q32NC0 220 aaPredicted RBP11.47□□□□□ -0.57
CLN6-223ENST00000637823 GTF2H2CQ6P1K8 395 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 MBOAT1Q6ZNC8 495 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 RD3Q7Z3Z2 195 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 CUZD1Q86UP6 607 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 DEFB119Q8N690 84 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 OR9A1PQ8NGU1 263 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 TRPC4APQ8TEL6 797 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 C10orf82Q8WW14 230 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 TFGQ92734 400 aaPredicted RBP11.47□□□□□ -0.57
CLN6-223ENST00000637823 ESAMQ96AP7 390 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 NSUN5Q96P11 429 aaKnown RBP11.47□□□□□ -0.57
CLN6-223ENST00000637823 PKP4Q99569 1192 aa11.47□□□□□ -0.57
CLN6-223ENST00000637823 TMEM79Q9BSE2 394 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms