RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 OR2L2Q8NH16 312 aa17.48■□□□□ 0.39
CLN6-212ENST00000636020 DEF6Q9H4E7 631 aa17.48■□□□□ 0.39
CLN6-212ENST00000636020 HEBP2Q9Y5Z4 205 aa17.48■□□□□ 0.39
CLN6-212ENST00000636020 DYTNA2CJ06 578 aa17.47■□□□□ 0.39
CLN6-212ENST00000636020 GPR39O43194 453 aa17.47■□□□□ 0.39
CLN6-212ENST00000636020 CRYABP02511 175 aaKnown RBP17.47■□□□□ 0.39
CLN6-212ENST00000636020 CD48P09326 243 aa17.47■□□□□ 0.39
CLN6-212ENST00000636020 HMGCLP35914 325 aa17.47■□□□□ 0.39
CLN6-212ENST00000636020 ZIC1Q15915 447 aa17.47■□□□□ 0.39
CLN6-212ENST00000636020 DPCR1Q3MIW9 517 aa17.47■□□□□ 0.39
CLN6-212ENST00000636020 CCDC183Q5T5S1 534 aa17.47■□□□□ 0.39
CLN6-212ENST00000636020 GPRC6AQ5T6X5 926 aa17.47■□□□□ 0.39
CLN6-212ENST00000636020 TLDC1Q6P9B6 456 aa17.47■□□□□ 0.39
CLN6-212ENST00000636020 MEX3BQ6ZN04 569 aaKnown RBP17.47■□□□□ 0.39
CLN6-212ENST00000636020 OVCH1Q7RTY7 1134 aa17.47■□□□□ 0.39
CLN6-212ENST00000636020 C19orf47Q8N9M1 422 aaKnown RBP17.47■□□□□ 0.39
CLN6-212ENST00000636020 OR11G2Q8NGC1 345 aa17.47■□□□□ 0.39
CLN6-212ENST00000636020 FAM71BQ8TC56 605 aa17.47■□□□□ 0.39
CLN6-212ENST00000636020 FKBP10Q96AY3 582 aa17.47■□□□□ 0.39
CLN6-212ENST00000636020 SPSB2Q99619 263 aa17.47■□□□□ 0.39
CLN6-212ENST00000636020 CHRNA10Q9GZZ6 450 aa17.47■□□□□ 0.39
CLN6-212ENST00000636020 CLSTN2Q9H4D0 955 aa17.47■□□□□ 0.39
CLN6-212ENST00000636020 TFB2MQ9H5Q4 396 aaKnown RBP17.47■□□□□ 0.39
CLN6-212ENST00000636020 WDR54Q9H977 334 aa17.47■□□□□ 0.39
CLN6-212ENST00000636020 MRM3Q9HC36 420 aaKnown RBP17.47■□□□□ 0.39
CLN6-212ENST00000636020 PLA2G3Q9NZ20 509 aa17.47■□□□□ 0.39
CLN6-212ENST00000636020 TINAGQ9UJW2 476 aa17.47■□□□□ 0.39
CLN6-212ENST00000636020 PCDHGB6Q9Y5F9 930 aa17.47■□□□□ 0.39
CLN6-212ENST00000636020 KLHL33A6NCF5 533 aa17.46■□□□□ 0.39
CLN6-212ENST00000636020 C2orf74A8MZ97 194 aa17.46■□□□□ 0.39
CLN6-212ENST00000636020 WISP2O76076 250 aa17.46■□□□□ 0.39
CLN6-212ENST00000636020 POLBP06746 335 aa17.46■□□□□ 0.39
CLN6-212ENST00000636020 ITGAXP20702 1163 aa17.46■□□□□ 0.39
CLN6-212ENST00000636020 KRT81Q14533 505 aa17.46■□□□□ 0.39
CLN6-212ENST00000636020 KRT31Q15323 416 aa17.46■□□□□ 0.39
CLN6-212ENST00000636020 LONRF2Q1L5Z9 754 aa17.46■□□□□ 0.39
CLN6-212ENST00000636020 FAM182AQ5T1J6 154 aa17.46■□□□□ 0.39
CLN6-212ENST00000636020 FKBP15Q5T1M5 1219 aa17.46■□□□□ 0.39
CLN6-212ENST00000636020 IRF2BP2Q7Z5L9 587 aa17.46■□□□□ 0.39
CLN6-212ENST00000636020 ADGRF3Q8IZF5 1079 aa17.46■□□□□ 0.39
CLN6-212ENST00000636020 NEK11Q8NG66 645 aa17.46■□□□□ 0.39
CLN6-212ENST00000636020 HAS2Q92819 552 aa17.46■□□□□ 0.39
CLN6-212ENST00000636020 SRPK1Q96SB4 655 aaKnown RBP17.46■□□□□ 0.39
CLN6-212ENST00000636020 TMEM121Q9BTD3 319 aa17.46■□□□□ 0.39
CLN6-212ENST00000636020 GSX1Q9H4S2 264 aaPredicted RBP17.46■□□□□ 0.39
CLN6-212ENST00000636020 ACTR10Q9NZ32 417 aa17.46■□□□□ 0.39
CLN6-212ENST00000636020 FAM8A1Q9UBU6 413 aa17.46■□□□□ 0.39
CLN6-212ENST00000636020 KCNK1O00180 336 aa17.45■□□□□ 0.38
CLN6-212ENST00000636020 ONECUT2O95948 504 aa17.45■□□□□ 0.38
CLN6-212ENST00000636020 ALBP02768 609 aa17.45■□□□□ 0.38
CLN6-212ENST00000636020 FTLP02792 175 aaPredicted RBP17.45■□□□□ 0.38
CLN6-212ENST00000636020 FERP16591 822 aa17.45■□□□□ 0.38
CLN6-212ENST00000636020 ARSEP51690 589 aa17.45■□□□□ 0.38
CLN6-212ENST00000636020 TMPRSS15P98073 1019 aa17.45■□□□□ 0.38
CLN6-212ENST00000636020 SLC25A11Q02978 314 aaKnown RBP17.45■□□□□ 0.38
CLN6-212ENST00000636020 ZBTB17Q13105 803 aa17.45■□□□□ 0.38
CLN6-212ENST00000636020 PCSK7Q16549 785 aa17.45■□□□□ 0.38
CLN6-212ENST00000636020 NKG7Q16617 165 aa17.45■□□□□ 0.38
CLN6-212ENST00000636020 SLC5A12Q1EHB4 618 aa17.45■□□□□ 0.38
CLN6-212ENST00000636020 SPESP1Q6UW49 350 aa17.45■□□□□ 0.38
CLN6-212ENST00000636020 DET1Q7L5Y6 550 aa17.45■□□□□ 0.38
CLN6-212ENST00000636020 TRIM73Q86UV7 250 aa17.45■□□□□ 0.38
CLN6-212ENST00000636020 LILRA3Q8N6C8 439 aaPredicted RBP17.45■□□□□ 0.38
CLN6-212ENST00000636020 PSMF1Q92530 271 aa17.45■□□□□ 0.38
CLN6-212ENST00000636020 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.45■□□□□ 0.38
CLN6-212ENST00000636020 TADA1Q96BN2 335 aa17.45■□□□□ 0.38
CLN6-212ENST00000636020 IMP4Q96G21 291 aaKnown RBP17.45■□□□□ 0.38
CLN6-212ENST00000636020 FERD3LQ96RJ6 166 aa17.45■□□□□ 0.38
CLN6-212ENST00000636020 CCM2Q9BSQ5 444 aa17.45■□□□□ 0.38
CLN6-212ENST00000636020 SLC26A1Q9H2B4 701 aa17.45■□□□□ 0.38
CLN6-212ENST00000636020 CXXC4Q9H2H0 198 aa17.45■□□□□ 0.38
CLN6-212ENST00000636020 CBX8Q9HC52 389 aa17.45■□□□□ 0.38
CLN6-212ENST00000636020 SCINQ9Y6U3 715 aa17.45■□□□□ 0.38
CLN6-212ENST00000636020 TMEM200CA6NKL6 621 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 RASAL1O95294 804 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 NDST3O95803 873 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 CCDC172P0C7W6 258 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 PYGMP11217 842 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 KLK2P20151 261 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 MX2P20592 715 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 ALAS2P22557 587 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 SOX11P35716 441 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 GCGRP47871 477 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 IFI35P80217 286 aaPredicted RBP17.44■□□□□ 0.38
CLN6-212ENST00000636020 SLC10A2Q12908 348 aaPredicted RBP17.44■□□□□ 0.38
CLN6-212ENST00000636020 PPP2R5EQ16537 467 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 RBBP7Q16576 425 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 LONRF1Q17RB8 773 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 ZDHHC20Q5W0Z9 365 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 FAM151BQ6UXP7 276 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 DAAM2Q86T65 1068 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 AMIGO1Q86WK6 493 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 FAM20CQ8IXL6 584 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 CFAP206Q8IYR0 622 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 CCNYQ8ND76 341 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 OR52E1Q8NGJ3 308 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 VPS50Q96JG6 964 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 GPAMQ9HCL2 828 aa17.44■□□□□ 0.38
CLN6-212ENST00000636020 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.44■□□□□ 0.38
CLN6-212ENST00000636020 TNFRSF10DQ9UBN6 386 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms