RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 C12orf65Q9H3J6 166 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-215ENST00000635727 REXO2Q9Y3B8 237 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-215ENST00000635727 DAPL1A0PJW8 107 aa17.16■□□□□ 0.34
CACNA1A-215ENST00000635727 VSTM5A8MXK1 200 aa17.16■□□□□ 0.34
CACNA1A-215ENST00000635727 BRINP1O60477 761 aa17.16■□□□□ 0.34
CACNA1A-215ENST00000635727 PGLSO95336 258 aa17.16■□□□□ 0.34
CACNA1A-215ENST00000635727 TOB1P50616 345 aaPredicted RBP17.16■□□□□ 0.34
CACNA1A-215ENST00000635727 BATFQ16520 125 aa17.16■□□□□ 0.34
CACNA1A-215ENST00000635727 TMEM164Q5U3C3 297 aa17.16■□□□□ 0.34
CACNA1A-215ENST00000635727 SLC29A4Q7RTT9 530 aa17.16■□□□□ 0.34
CACNA1A-215ENST00000635727 MSL3Q8N5Y2 521 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-215ENST00000635727 PCDHGC4Q9Y5F7 938 aa17.16■□□□□ 0.34
CACNA1A-215ENST00000635727 A0A1W2PPM1 405 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 APOC4-APOC2K7ER74 178 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 APOC2P02655 101 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 CREB5Q02930 508 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 ST3GAL1Q11201 340 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 MAD2L1BPQ15013 274 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 GPR21Q99679 349 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 J3QLW9 94 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 LDOC1O95751 146 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 TGFB1P01137 390 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 ZNF19P17023 458 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 AGXTP21549 392 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 FASLGP48023 281 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 RPIAP49247 311 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 DCDC1P59894 354 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 RAB4BP61018 213 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 HNRNPKP61978 463 aaKnown RBP eCLIP17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 GRK1Q15835 563 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 FAM46DQ8NEK8 389 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 CEP76Q8TAP6 659 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 NXNL1Q96CM4 212 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 GIN1Q9NXP7 522 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 NDUFS4O43181 175 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 WFS1O76024 890 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 FIP1L1Q6UN15 594 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 OTOP1Q7RTM1 612 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 GPR142Q7Z601 462 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 CUZD1Q86UP6 607 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 ARL14EPQ8N8R7 260 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 MMABQ96EY8 250 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 MYEF2Q9P2K5 600 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 ABCD2Q9UBJ2 740 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 GNG8Q9UK08 70 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 NPIPA5E9PKD4 350 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 CSF2P04141 144 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 ZFPM1Q8IX07 1006 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 TWIST2Q8WVJ9 160 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 NINJ1Q92982 152 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 MAP3K14Q99558 947 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 NPIPA1Q9UND3 350 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 PLAGL2Q9UPG8 496 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 MEMO1Q9Y316 297 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 CARNS1A5YM72 827 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 SHOXO15266 292 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 GPD2P43304 727 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 RPS9P46781 194 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 MAP2K5Q13163 448 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 OR10A6Q8NH74 314 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 HINT2Q9BX68 163 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 CSTF2P33240 577 aaKnown RBP eCLIP17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 LEPRP48357 1165 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 PRR5P85299 388 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 TTMPQ5BVD1 217 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 PLA2G15Q8NCC3 412 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 CASTOR1Q8WTX7 329 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 SH3YL1Q96HL8 342 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 ERMAPQ96PL5 475 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 CDH19Q9H159 772 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 NANSQ9NR45 359 aa17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 LYARQ9NX58 379 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-215ENST00000635727 FABP12A6NFH5 140 aa17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 C9J4A7 227 aa17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 CLDN9O95484 217 aa17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 C8orf89P0DMQ9 161 aa17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 TYRP1P17643 537 aa17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 CLRN1P58418 232 aa17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 OR4K17Q8NGC6 315 aa17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 DLG3Q92796 817 aa17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 EZH1Q92800 747 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 HCN2Q9UL51 889 aa17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 WNT10BO00744 389 aa17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 PLD2O14939 933 aa17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 DSC2Q02487 901 aa17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 CITO14578 2027 aa17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 ATAD1Q8NBU5 361 aa17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 HDAC2Q92769 488 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 HBS1LQ9Y450 684 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 A0A0J9YVX5 310 aa17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 A0A0U1RQJ8 604 aa17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 REM1O75628 298 aa17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 ALADP13716 330 aa17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 IL23RQ5VWK5 629 aa17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 BEND7Q8N7W2 519 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 GATSQ8NAP1 163 aa17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 UROC1Q96N76 676 aa17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 PRAMEF1O95521 474 aa17.14■□□□□ 0.33
CACNA1A-215ENST00000635727 RBM48Q5RL73 367 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms