RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 ERVK-6Q9BXR3 956 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 SHCBP1LQ9BZQ2 653 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 ZCCHC2Q9C0B9 1178 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 ILKAPQ9H0C8 392 aaPredicted RBP9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 KCNK4Q9NYG8 393 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 TSR3Q9UJK0 312 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 RALYQ9UKM9 306 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 CYP8B1Q9UNU6 501 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 PCYT1BQ9Y5K3 369 aaPredicted RBP9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 IGLON5A6NGN9 336 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 OR2AG2A6NM03 316 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 TMEM233B4DJY2 109 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 EIF3FO00303 357 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 HGSO14964 777 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 KPNA5O15131 536 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 GRID2O43424 1007 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 DCTN3O75935 186 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 FTH1P02794 183 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 ZNF883P0CG24 379 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 CBSLP0DN79 551 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 ENO3P13929 434 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 NDUFV2P19404 249 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 CBSP35520 551 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 AGTR2P50052 363 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 AQP5P55064 265 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 PRKAA1Q13131 559 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 COL9A2Q14055 689 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 SETDB1Q15047 1291 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 AGERQ15109 404 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 TGFBIQ15582 683 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 PHKG1Q16816 387 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 TTC31Q49AM3 519 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 IL27RAQ6UWB1 636 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 FRA10AC1Q70Z53 315 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 GLRX5Q86SX6 157 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 PROSER1Q86XN7 944 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 GPSM1Q86YR5 675 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 TMPRSS6Q8IU80 811 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 RASGRP3Q8IV61 690 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 FBXO39Q8N4B4 442 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 LILRA3Q8N6C8 439 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 PTGR2Q8N8N7 351 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 AGR3Q8TD06 166 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 MRGPRX1Q96LB2 322 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 NSUN5Q96P11 429 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 C1QTNF3Q9BXJ4 246 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 WWP1Q9H0M0 922 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 PCED1AQ9H1Q7 454 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 EML4Q9HC35 981 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 ITM2CQ9NQX7 267 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 FBXL12Q9NXK8 326 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 TMCO1Q9UM00 188 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 SCML1Q9UN30 329 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 RAP2CQ9Y3L5 183 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 LAMA1P25391 3075 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 PCDH15Q96QU1 1955 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 MATN2O00339 956 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 PLRG1O43660 514 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 GPC4O75487 556 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 SUPT7LO94864 414 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 UBOX5O94941 541 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 CAPNS1P04632 268 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 RPS17P08708 135 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 TSPAN8P19075 237 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 SERPINB3P29508 390 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 PRLHRP49683 370 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 HK2P52789 917 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 ZBTB16Q05516 673 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 TMEM115Q12893 351 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 ZXDCQ2QGD7 858 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 WSCD2Q2TBF2 565 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 TMEM259Q4ZIN3 620 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 ADGRG6Q86SQ4 1221 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 ZNF547Q8IVP9 402 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 GBP7Q8N8V2 638 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 SIPA1Q96FS4 1042 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 COX14Q96I36 57 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 LRRC37BQ96QE4 947 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 TRMOQ9BU70 441 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 MYLK2Q9H1R3 596 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 STN1Q9H668 368 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 ZBTB26Q9HCK0 441 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 MBNL1Q9NR56 388 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 UTP6Q9NYH9 597 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 WSB2Q9NYS7 404 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 HEY2Q9UBP5 337 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 PCDHGB2Q9Y5G2 931 aa9.3□□□□□ -0.92
PDLIM5-223ENST00000627587 GON4LQ3T8J9 2241 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 ADAMTS9Q9P2N4 1935 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 CACNA1GO43497 2377 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 NCF1BA6NI72 391 aaPredicted RBP9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 NCF1CA8MVU1 366 aaPredicted RBP9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 TAF4O00268 1085 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 SH3BP5O60239 455 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 NUAK1O60285 661 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 SNX2O60749 519 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 ACADMP11310 421 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 NCF1P14598 390 aaPredicted RBP9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 IDH3AP50213 366 aa9.29□□□□□ -0.92
PDLIM5-223ENST00000627587 RPL14P50914 215 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms