RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 FARSBQ9NSD9 589 aaKnown RBP9.24□□□□□ -0.93
PDPN-212ENST00000621990 VAPAQ9P0L0 249 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 RSL24D1Q9UHA3 163 aaKnown RBP9.24□□□□□ -0.93
PDPN-212ENST00000621990 TSR3Q9UJK0 312 aaKnown RBP9.24□□□□□ -0.93
PDPN-212ENST00000621990 AP3M1Q9Y2T2 418 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 LOC730098B7Z3J9 87 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 H0Y858 1186 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 CLOCKO15516 846 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 FKTNO75072 461 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 STK16O75716 305 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 ANXA6P08133 673 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 PCSK2P16519 638 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 GABRR2P28476 465 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 AKT1P31749 480 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 SNRPD1P62314 119 aaKnown RBP9.23□□□□□ -0.93
PDPN-212ENST00000621990 CYP4F8P98187 520 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 CREMQ03060 361 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 USP39Q53GS9 565 aaKnown RBP9.23□□□□□ -0.93
PDPN-212ENST00000621990 SPOUT1Q5T280 376 aaKnown RBP9.23□□□□□ -0.93
PDPN-212ENST00000621990 ZDHHC20Q5W0Z9 365 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 LRRC66Q68CR7 880 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 FKBP9P1Q75LS8 142 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 PLPP6Q8IY26 295 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 RGL4Q8IZJ4 473 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 ZNF296Q8WUU4 475 aaPredicted RBP9.23□□□□□ -0.93
PDPN-212ENST00000621990 NUDT8Q8WV74 236 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 MRPS31Q92665 395 aaKnown RBP9.23□□□□□ -0.93
PDPN-212ENST00000621990 HHIPQ96QV1 700 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 ZBTB18Q99592 522 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 YTHDF1Q9BYJ9 559 aaKnown RBP9.23□□□□□ -0.93
PDPN-212ENST00000621990 LRTM1Q9HBL6 345 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 TLR9Q9NR96 1032 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 SLC25A37Q9NYZ2 338 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 TBX21Q9UL17 535 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 ZNF490Q9ULM2 529 aaPredicted RBP9.23□□□□□ -0.93
PDPN-212ENST00000621990 SH3BP1Q9Y3L3 701 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 ANGPTL3Q9Y5C1 460 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 FADS3Q9Y5Q0 445 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 LAMA2P24043 3122 aaKnown RBP9.23□□□□□ -0.93
PDPN-212ENST00000621990 KCNE1BA0A087WTH5 132 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 DFNA5O60443 496 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 CLDN9O95484 217 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 PGRP06401 933 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 CKMP06732 381 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 ACPPP15309 386 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 HOXB9P17482 250 aaPredicted RBP9.23□□□□□ -0.93
PDPN-212ENST00000621990 LHCGRP22888 699 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 AOAHP28039 575 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 PCSK6P29122 969 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 HNRNPFP52597 415 aaKnown RBP9.23□□□□□ -0.93
PDPN-212ENST00000621990 FAM174BQ3ZCQ3 159 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 HABP4Q5JVS0 413 aaKnown RBP9.23□□□□□ -0.93
PDPN-212ENST00000621990 CACHD1Q5VU97 1274 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 C1orf53Q5VUE5 145 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 TTC33Q6PID6 262 aaPredicted RBP9.23□□□□□ -0.93
PDPN-212ENST00000621990 SUSD1Q6UWL2 747 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 ABRAXAS1Q6UWZ7 409 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 USP45Q70EL2 814 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 LRRC70Q7Z2Q7 622 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 TCAIMQ8N3R3 496 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 DHRSXQ8N5I4 330 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 TMIGD2Q96BF3 282 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 ULK4Q96C45 1275 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 DTNBP1Q96EV8 351 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 ZNF641Q96N77 438 aaPredicted RBP9.23□□□□□ -0.93
PDPN-212ENST00000621990 COPS8Q99627 209 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 SLC12A9Q9BXP2 914 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 CEP44Q9C0F1 390 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 SLC32A1Q9H598 525 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 TIMMDC1Q9NPL8 285 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 C1orf109Q9NX04 203 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 KLQ9UEF7 1012 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 PCDHGA11Q9Y5H2 935 aa9.23□□□□□ -0.93
PDPN-212ENST00000621990 TRAV19A0A0A6YYK7 116 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 ABHD14A-ACY1A0A1B0GW23 586 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 SERTM1A2A2V5 107 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 NRG2O14511 850 aaPredicted RBP9.22□□□□□ -0.93
PDPN-212ENST00000621990 FFAR3O14843 346 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 GPR42O15529 346 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 TGM5O43548 720 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 NUAK1O60285 661 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 TRMUO75648 421 aaKnown RBP9.22□□□□□ -0.93
PDPN-212ENST00000621990 HPRP00739 348 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 ANXA5P08758 320 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 CCR7P32248 378 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 CTSOP43234 321 aaPredicted RBP9.22□□□□□ -0.93
PDPN-212ENST00000621990 SLC6A12P48065 614 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 NRIP1P48552 1158 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 MNX1P50219 401 aaPredicted RBP9.22□□□□□ -0.93
PDPN-212ENST00000621990 ALDH3A2P51648 485 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 CDH15P55291 814 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 HMGCS1Q01581 520 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 TLE2Q04725 743 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 BOP1Q14137 746 aaKnown RBP9.22□□□□□ -0.93
PDPN-212ENST00000621990 CBX2Q14781 532 aaPredicted RBP9.22□□□□□ -0.93
PDPN-212ENST00000621990 MAPKAPK3Q16644 382 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 ZXDCQ2QGD7 858 aaPredicted RBP9.22□□□□□ -0.93
PDPN-212ENST00000621990 ATP13A5Q4VNC0 1218 aa9.22□□□□□ -0.93
PDPN-212ENST00000621990 FAM98BQ52LJ0 330 aaKnown RBP9.22□□□□□ -0.93
PDPN-212ENST00000621990 LRIF1Q5T3J3 769 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms