RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 ABRAXAS1Q6UWZ7 409 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 WASH2PQ6VEQ5 465 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 TAX1BP1Q86VP1 789 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 NUDCD3Q8IVD9 361 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 C10orf107Q8IVU9 208 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 FBXO15Q8NCQ5 510 aaPredicted RBP7.87□□□□□ -1.15
TARDBP-219ENST00000617757 PHC3Q8NDX5 983 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 MCOLN3Q8TDD5 553 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 DYDC1Q8WWB3 177 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 CKAP2Q8WWK9 683 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 TFGQ92734 400 aaPredicted RBP7.87□□□□□ -1.15
TARDBP-219ENST00000617757 EXT2Q93063 718 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 MAGEB18Q96M61 343 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 LRFN3Q9BTN0 628 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 LRRC61Q9BV99 259 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 GSDMCQ9BYG8 508 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 ERVMER34-1Q9H9K5 563 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 WASH6PQ9NQA3 447 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 PRDM8Q9NQV8 689 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 UTP6Q9NYH9 597 aaKnown RBP7.87□□□□□ -1.15
TARDBP-219ENST00000617757 NUDT4Q9NZJ9 180 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 SIRPGQ9P1W8 387 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 TBC1D29Q9UFV1 150 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 APOBEC3BQ9UH17 382 aaKnown RBP7.87□□□□□ -1.15
TARDBP-219ENST00000617757 PCOLCE2Q9UKZ9 415 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 TMCO1Q9UM00 188 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 PDE10AQ9Y233 779 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 SNX11Q9Y5W9 270 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 R4GN57 208 aa7.87□□□□□ -1.15
TARDBP-219ENST00000617757 MYO15AQ9UKN7 3530 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 A6NCN8 305 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 IFRD1O00458 451 aaPredicted RBP7.86□□□□□ -1.15
TARDBP-219ENST00000617757 IPO13O94829 963 aaKnown RBP7.86□□□□□ -1.15
TARDBP-219ENST00000617757 EPN2O95208 641 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 GUCA1CO95843 209 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 S100BP04271 92 aaPredicted RBP7.86□□□□□ -1.15
TARDBP-219ENST00000617757 ANXA5P08758 320 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 HIST1H2AGP0C0S8 130 aaPredicted RBP7.86□□□□□ -1.15
TARDBP-219ENST00000617757 NEFHP12036 1026 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 F3P13726 295 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 GFAPP14136 432 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 HIST1H2ADP20671 130 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 IMPDH1P20839 514 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 BGNP21810 368 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 MAP4P27816 1152 aaKnown RBP7.86□□□□□ -1.15
TARDBP-219ENST00000617757 HALP42357 657 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 BDKRB1P46663 353 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 PRKAA2P54646 552 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 AP1S2P56377 157 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 DNAJB13P59910 316 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 HNRNPKP61978 463 aaKnown RBP eCLIP7.86□□□□□ -1.15
TARDBP-219ENST00000617757 NFKB2Q00653 900 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 GRB7Q14451 532 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 RPE65Q16518 533 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 LPAL2Q16609 132 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 PDK4Q16654 411 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 PFKFB4Q16877 469 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 DUOXA1Q1HG43 343 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 ZNF423Q2M1K9 1284 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 CCSMST1Q4G0I0 132 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.86□□□□□ -1.15
TARDBP-219ENST00000617757 CDKL4Q5MAI5 379 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 TTC19Q6DKK2 380 aaPredicted RBP7.86□□□□□ -1.15
TARDBP-219ENST00000617757 SLC23A3Q6PIS1 610 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 FRA10AC1Q70Z53 315 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 RABEPKQ7Z6M1 372 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 TAF8Q7Z7C8 310 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 SLC22A9Q8IVM8 553 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 FBXO39Q8N4B4 442 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 PTGR2Q8N8N7 351 aaPredicted RBP7.86□□□□□ -1.15
TARDBP-219ENST00000617757 PDPRQ8NCN5 879 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 OR5AR1Q8NGP9 310 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 OR6Y1Q8NGX8 325 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 OR5K2Q8NHB8 316 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 CEP76Q8TAP6 659 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 MAGEC3Q8TD91 643 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 ZNF75CPQ92670 426 aaPredicted RBP7.86□□□□□ -1.15
TARDBP-219ENST00000617757 CCDC126Q96EE4 140 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 PHF21BQ96EK2 531 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 LOXL4Q96JB6 756 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 HIST1H2AHQ96KK5 128 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 C12orf66Q96MD2 445 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 FERD3LQ96RJ6 166 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 HIST1H2AJQ99878 128 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 H2AFJQ9BTM1 129 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 GATA5Q9BWX5 397 aaPredicted RBP7.86□□□□□ -1.15
TARDBP-219ENST00000617757 CAPS2Q9BXY5 557 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 TRIM54Q9BYV2 358 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 CCDC134Q9H6E4 229 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 MANSC1Q9H8J5 431 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 ARL15Q9NXU5 204 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 NCKIPSDQ9NZQ3 722 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 CD274Q9NZQ7 290 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 SCHIP1Q9P0W5 487 aaPredicted RBP7.86□□□□□ -1.15
TARDBP-219ENST00000617757 TAAR2Q9P1P5 351 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 SPASTQ9UBP0 616 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 ADAM21Q9UKJ8 722 aa7.86□□□□□ -1.15
TARDBP-219ENST00000617757 CFAP20Q9Y6A4 193 aaKnown RBP7.86□□□□□ -1.15
TARDBP-219ENST00000617757 GON4LQ3T8J9 2241 aa7.85□□□□□ -1.15
TARDBP-219ENST00000617757 KRT87PA6NCN2 255 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms