RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 COG4Q9H9E3 785 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 SAR1AQ9NR31 198 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 RNF112Q9ULX5 631 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 KCNK6Q9Y257 313 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 ST14Q9Y5Y6 855 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 DLX3O60479 287 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 WNT1P04628 370 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 RBP1P09455 135 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 MYL2P10916 166 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 HTR1BP28222 390 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 PTDSS1P48651 473 aaKnown RBP15.92■□□□□ 0.14
SNAP47-213ENST00000617596 KIAA1024LP59773 190 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 ATP6V0D1P61421 351 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 PYCR3Q53H96 274 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 CGB2Q6NT52 195 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 GALNT13Q8IUC8 556 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 RGL4Q8IZJ4 473 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 OR2L2Q8NH16 312 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 B4GALNT2Q8NHY0 566 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 PHF21BQ96EK2 531 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 PDLIM5Q96HC4 596 aaKnown RBP15.92■□□□□ 0.14
SNAP47-213ENST00000617596 LINC00615Q96LM1 132 aaPredicted RBP15.92■□□□□ 0.14
SNAP47-213ENST00000617596 WDR92Q96MX6 357 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 ATOH8Q96SQ7 321 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 TUBB6Q9BUF5 446 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 IRAK4Q9NWZ3 460 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 CIDEBQ9UHD4 219 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 PSMD13Q9UNM6 376 aa15.92■□□□□ 0.14
SNAP47-213ENST00000617596 MGAT4DA6NG13 374 aa15.91■□□□□ 0.14
SNAP47-213ENST00000617596 F8W8V4 182 aa15.91■□□□□ 0.14
SNAP47-213ENST00000617596 NVLO15381 856 aaKnown RBP15.91■□□□□ 0.14
SNAP47-213ENST00000617596 SLCO2B1O94956 709 aa15.91■□□□□ 0.14
SNAP47-213ENST00000617596 RPL10P27635 214 aaKnown RBP15.91■□□□□ 0.14
SNAP47-213ENST00000617596 HOXA6P31267 233 aa15.91■□□□□ 0.14
SNAP47-213ENST00000617596 HK3P52790 923 aa15.91■□□□□ 0.14
SNAP47-213ENST00000617596 KPNB1Q14974 876 aaKnown RBP15.91■□□□□ 0.14
SNAP47-213ENST00000617596 CHI3L2Q15782 390 aa15.91■□□□□ 0.14
SNAP47-213ENST00000617596 PHKG1Q16816 387 aa15.91■□□□□ 0.14
SNAP47-213ENST00000617596 SBSNQ6UWP8 590 aa15.91■□□□□ 0.14
SNAP47-213ENST00000617596 ZYG11AQ6WRX3 759 aa15.91■□□□□ 0.14
SNAP47-213ENST00000617596 SLC36A4Q6YBV0 504 aa15.91■□□□□ 0.14
SNAP47-213ENST00000617596 STAG3L4Q8TBR4 150 aa15.91■□□□□ 0.14
SNAP47-213ENST00000617596 ZNF395Q9H8N7 513 aaPredicted RBP15.91■□□□□ 0.14
SNAP47-213ENST00000617596 CHCHD3Q9NX63 227 aaKnown RBP15.91■□□□□ 0.14
SNAP47-213ENST00000617596 KNL1Q8NG31 2342 aa15.91■□□□□ 0.14
SNAP47-213ENST00000617596 MAGEA13PA6NCF6 341 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 KPNA5O15131 536 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 KMOO15229 486 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 HOXC4P09017 264 aaPredicted RBP15.9■□□□□ 0.14
SNAP47-213ENST00000617596 MTHFD2P13995 350 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 RABIFP47224 123 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 KPNA2P52292 529 aaKnown RBP15.9■□□□□ 0.14
SNAP47-213ENST00000617596 YPEL5P62699 121 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 RPS27LQ71UM5 84 aaKnown RBP15.9■□□□□ 0.14
SNAP47-213ENST00000617596 LONP2Q86WA8 852 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 HID1Q8IV36 788 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 FBXL6Q8N531 539 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 CCL4L1Q8NHW4 92 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 ZNF75CPQ92670 426 aaPredicted RBP15.9■□□□□ 0.14
SNAP47-213ENST00000617596 NR1H4Q96RI1 486 aaPredicted RBP15.9■□□□□ 0.14
SNAP47-213ENST00000617596 VCX3BQ9H321 246 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 TCEAL2Q9H3H9 227 aaPredicted RBP15.9■□□□□ 0.14
SNAP47-213ENST00000617596 OSGEPL1Q9H4B0 414 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 VCX3AQ9NNX9 186 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 KLHL42Q9P2K6 505 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 KLQ9UEF7 1012 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 KLF15Q9UIH9 416 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 SUPT3HB4E1H0 165 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 H3BM21 787 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 KERAO60938 352 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 SUPT3HO75486 399 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 GUCA1CO95843 209 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 CBSLP0DN79 551 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 FGF3P11487 239 aaPredicted RBP15.9■□□□□ 0.14
SNAP47-213ENST00000617596 IMPDH2P12268 514 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 TAC1P20366 129 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 ITPKAP23677 461 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 CBSP35520 551 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 SRP54P61011 504 aaKnown RBP15.9■□□□□ 0.14
SNAP47-213ENST00000617596 SF3A3Q12874 501 aaKnown RBP eCLIP15.9■□□□□ 0.14
SNAP47-213ENST00000617596 PDK4Q16654 411 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 PFKFB4Q16877 469 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 ALG11Q2TAA5 492 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 MUM1Q2TAK8 710 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 LRRC23Q53EV4 343 aaPredicted RBP15.9■□□□□ 0.14
SNAP47-213ENST00000617596 MBOAT1Q6ZNC8 495 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 WDR5BQ86VZ2 330 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 RBM12BQ8IXT5 1001 aaKnown RBP15.9■□□□□ 0.14
SNAP47-213ENST00000617596 RHEBL1Q8TAI7 183 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 HM13Q8TCT9 377 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 ESAMQ96AP7 390 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 KLHDC7BQ96G42 594 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 LRRC37BQ96QE4 947 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 MANSC1Q9H8J5 431 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 TM9SF3Q9HD45 589 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 SLCO1B3Q9NPD5 702 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 OXSMQ9NWU1 459 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 SIRPGQ9P1W8 387 aa15.9■□□□□ 0.14
SNAP47-213ENST00000617596 CFAP20Q9Y6A4 193 aaKnown RBP15.9■□□□□ 0.14
SNAP47-213ENST00000617596 CCDC163A0A0D9SF12 145 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms