RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 CLCNKBP51801 687 aa13.77□□□□□ -0.21
TNFRSF11A-205ENST00000616710 GEMP55040 296 aa13.77□□□□□ -0.21
TNFRSF11A-205ENST00000616710 SUZ12Q15022 739 aaKnown RBP13.77□□□□□ -0.21
TNFRSF11A-205ENST00000616710 LUZP2Q86TE4 346 aa13.77□□□□□ -0.21
TNFRSF11A-205ENST00000616710 AKAP1Q92667 903 aaKnown RBP eCLIP13.77□□□□□ -0.21
TNFRSF11A-205ENST00000616710 SLC38A4Q969I6 547 aa13.77□□□□□ -0.21
TNFRSF11A-205ENST00000616710 GJD4Q96KN9 370 aaPredicted RBP13.77□□□□□ -0.21
TNFRSF11A-205ENST00000616710 TTPALQ9BTX7 342 aa13.77□□□□□ -0.21
TNFRSF11A-205ENST00000616710 EIF2B3Q9NR50 452 aaKnown RBP13.77□□□□□ -0.21
TNFRSF11A-205ENST00000616710 CCDC59Q9P031 241 aaKnown RBP13.77□□□□□ -0.21
TNFRSF11A-205ENST00000616710 DNMT3BQ9UBC3 853 aaKnown RBP13.77□□□□□ -0.21
TNFRSF11A-205ENST00000616710 TRHDEQ9UKU6 1024 aa13.77□□□□□ -0.21
TNFRSF11A-205ENST00000616710 KIAA1257Q9ULG3 409 aa13.77□□□□□ -0.21
TNFRSF11A-205ENST00000616710 FZD10Q9ULW2 581 aa13.77□□□□□ -0.21
TNFRSF11A-205ENST00000616710 CLEC4AQ9UMR7 237 aa13.77□□□□□ -0.21
TNFRSF11A-205ENST00000616710 PKP3Q9Y446 797 aa13.77□□□□□ -0.21
TNFRSF11A-205ENST00000616710 ARID1BQ8NFD5 2236 aaPredicted RBP13.77□□□□□ -0.21
TNFRSF11A-205ENST00000616710 A0A1B0GTL3 188 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 CKMT1AP12532 417 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 GHRHRQ02643 423 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 CHMP1BQ7LBR1 199 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 OR6F1Q8NGZ6 308 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 FKBP10Q96AY3 582 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 FRMD6Q96NE9 622 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 ACOT13Q9NPJ3 140 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 ATP6V1HQ9UI12 483 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 RWDD3Q9Y3V2 267 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 A0A1W2PQ09 198 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 CDC7O00311 574 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 CAPNS1P04632 268 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 PRSS56P0CW18 603 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 SLC2A3P11169 496 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 GLUD2P49448 558 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 CDKN2DP55273 166 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 ARHGEF6Q15052 776 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 SLC25A52Q3SY17 297 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 YIPF7Q8N8F6 280 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 CDCA5Q96FF9 252 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 IL4I1Q96RQ9 567 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 CLEC4MQ9H2X3 399 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 NTN4Q9HB63 628 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 CRNNQ9UBG3 495 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 SNX7Q9UNH6 387 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 LYVE1Q9Y5Y7 322 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 ZNF142P52746 1687 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 B4GALT4O60513 344 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 DDCP20711 480 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 CYP2A7P20853 494 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 UBA1P22314 1058 aaKnown RBP13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 EVI2BP34910 448 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 EEFSECP57772 596 aaKnown RBP13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 SLC10A6Q3KNW5 377 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 ZRANB3Q5FWF4 1079 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 GALNT7Q86SF2 657 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 LSM14AQ8ND56 463 aaKnown RBP13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 OR5K1Q8NHB7 308 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 GTPBP3Q969Y2 492 aaKnown RBP13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 PTERQ96BW5 349 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 ASIC4Q96FT7 647 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 TRMOQ9BU70 441 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 SLIRPQ9GZT3 109 aaKnown RBP13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 ZNF385DQ9H6B1 395 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 FKBP14Q9NWM8 211 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 KCNH4Q9UQ05 1017 aa13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 MRPS7Q9Y2R9 242 aaKnown RBP13.76□□□□□ -0.21
TNFRSF11A-205ENST00000616710 CIB4A0PJX0 185 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 E9PAM4 449 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 PLK4O00444 970 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 PER2O15055 1255 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 ZNF45Q02386 682 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 RAD51Q06609 339 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 LCP2Q13094 533 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 GALNT3Q14435 633 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 DACT2Q5SW24 774 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 ERICH5Q6P6B1 374 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 GADL1Q6ZQY3 521 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 GPRIN3Q6ZVF9 776 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 KRT74Q7RTS7 529 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 VTCN1Q7Z7D3 282 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 TMEM199Q8N511 208 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 TOR1AIP2Q8NFQ8 470 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 ST8SIA2Q92186 375 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 VMP1Q96GC9 406 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 HDHD5Q9BXW7 423 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 NKIRAS2Q9NYR9 191 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 VAPAQ9P0L0 249 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 NLKQ9UBE8 527 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 ERVH48-1M5A8F1 160 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 MYCP01106 439 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 SDHBP21912 280 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 CREB5Q02930 508 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 ELP6Q0PNE2 266 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 BTN1A1Q13410 526 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 FGFBP1Q14512 234 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 CPSF6Q16630 551 aaKnown RBP eCLIP13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 INO80DQ53TQ3 878 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 SPANXN4Q5MJ08 99 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 ASB18Q6ZVZ8 466 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 GLCCI1Q86VQ1 547 aa13.75□□□□□ -0.21
TNFRSF11A-205ENST00000616710 EXOC2Q96KP1 924 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms