RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 MLIPQ5VWP3 458 aa17.3■□□□□ 0.36
SMN2-213ENST00000614240 SLC6A19Q695T7 634 aa17.3■□□□□ 0.36
SMN2-213ENST00000614240 GLIS1Q8NBF1 620 aa17.3■□□□□ 0.36
SMN2-213ENST00000614240 CCDC110Q8TBZ0 833 aa17.3■□□□□ 0.36
SMN2-213ENST00000614240 TFGQ92734 400 aaPredicted RBP17.3■□□□□ 0.36
SMN2-213ENST00000614240 PNPLA2Q96AD5 504 aa17.3■□□□□ 0.36
SMN2-213ENST00000614240 NRTNQ99748 197 aa17.3■□□□□ 0.36
SMN2-213ENST00000614240 PITPNM3Q9BZ71 974 aa17.3■□□□□ 0.36
SMN2-213ENST00000614240 LUC7LQ9NQ29 371 aaKnown RBP17.3■□□□□ 0.36
SMN2-213ENST00000614240 CUEDC1Q9NWM3 386 aaPredicted RBP17.3■□□□□ 0.36
SMN2-213ENST00000614240 FEZ2Q9UHY8 353 aaPredicted RBP17.3■□□□□ 0.36
SMN2-213ENST00000614240 BSNQ9UPA5 3926 aa17.29■□□□□ 0.36
SMN2-213ENST00000614240 LDB2O43679 373 aa17.29■□□□□ 0.36
SMN2-213ENST00000614240 RBP3P10745 1247 aa17.29■□□□□ 0.36
SMN2-213ENST00000614240 PTMSP20962 102 aa17.29■□□□□ 0.36
SMN2-213ENST00000614240 RPA4Q13156 261 aa17.29■□□□□ 0.36
SMN2-213ENST00000614240 MRPL49Q13405 166 aaKnown RBP17.29■□□□□ 0.36
SMN2-213ENST00000614240 CDHR3Q6ZTQ4 885 aa17.29■□□□□ 0.36
SMN2-213ENST00000614240 SERPINA9Q86WD7 417 aa17.29■□□□□ 0.36
SMN2-213ENST00000614240 RBMXL3Q8N7X1 1067 aaKnown RBP17.29■□□□□ 0.36
SMN2-213ENST00000614240 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.29■□□□□ 0.36
SMN2-213ENST00000614240 DNAJC1Q96KC8 554 aaKnown RBP17.29■□□□□ 0.36
SMN2-213ENST00000614240 SPATA13Q96N96 652 aa17.29■□□□□ 0.36
SMN2-213ENST00000614240 IP6K3Q96PC2 410 aa17.29■□□□□ 0.36
SMN2-213ENST00000614240 FAM118BQ9BPY3 351 aa17.29■□□□□ 0.36
SMN2-213ENST00000614240 C17orf62Q9BQA9 187 aa17.29■□□□□ 0.36
SMN2-213ENST00000614240 DHRS4Q9BTZ2 278 aa17.29■□□□□ 0.36
SMN2-213ENST00000614240 IRAK4Q9NWZ3 460 aa17.29■□□□□ 0.36
SMN2-213ENST00000614240 TFR2Q9UP52 801 aa17.29■□□□□ 0.36
SMN2-213ENST00000614240 PCDHA13Q9Y5I0 950 aa17.29■□□□□ 0.36
SMN2-213ENST00000614240 SPTAN1Q13813 2472 aaKnown RBP17.29■□□□□ 0.36
SMN2-213ENST00000614240 SPTBN1Q01082 2364 aaKnown RBP17.28■□□□□ 0.36
SMN2-213ENST00000614240 A1L4Q6 167 aa17.28■□□□□ 0.36
SMN2-213ENST00000614240 PEX12O00623 359 aa17.28■□□□□ 0.36
SMN2-213ENST00000614240 OR2B3O76000 313 aa17.28■□□□□ 0.36
SMN2-213ENST00000614240 ACRV1P26436 265 aa17.28■□□□□ 0.36
SMN2-213ENST00000614240 CETN2P41208 172 aa17.28■□□□□ 0.36
SMN2-213ENST00000614240 CDKN1CP49918 316 aaPredicted RBP17.28■□□□□ 0.36
SMN2-213ENST00000614240 NAP1L1P55209 391 aaKnown RBP17.28■□□□□ 0.36
SMN2-213ENST00000614240 MSLNQ13421 630 aaPredicted RBP17.28■□□□□ 0.36
SMN2-213ENST00000614240 BOP1Q14137 746 aaKnown RBP17.28■□□□□ 0.36
SMN2-213ENST00000614240 VWA5B1Q5TIE3 1220 aa17.28■□□□□ 0.36
SMN2-213ENST00000614240 C1orf189Q5VU69 101 aa17.28■□□□□ 0.36
SMN2-213ENST00000614240 SPESP1Q6UW49 350 aa17.28■□□□□ 0.36
SMN2-213ENST00000614240 ADGRF3Q8IZF5 1079 aa17.28■□□□□ 0.36
SMN2-213ENST00000614240 C19orf47Q8N9M1 422 aaKnown RBP17.28■□□□□ 0.36
SMN2-213ENST00000614240 Q8NA96 180 aa17.28■□□□□ 0.36
SMN2-213ENST00000614240 RNF214Q8ND24 703 aa17.28■□□□□ 0.36
SMN2-213ENST00000614240 TCTN2Q96GX1 697 aa17.28■□□□□ 0.36
SMN2-213ENST00000614240 FER1L6-AS2Q96M78 137 aa17.28■□□□□ 0.36
SMN2-213ENST00000614240 ALS2CR12Q96Q35 445 aa17.28■□□□□ 0.36
SMN2-213ENST00000614240 SMAD5Q99717 465 aaKnown RBP17.28■□□□□ 0.36
SMN2-213ENST00000614240 C19orf43Q9BQ61 176 aa17.28■□□□□ 0.36
SMN2-213ENST00000614240 OSBPL8Q9BZF1 889 aa17.28■□□□□ 0.36
SMN2-213ENST00000614240 C5AR2Q9P296 337 aa17.28■□□□□ 0.36
SMN2-213ENST00000614240 AP1M2Q9Y6Q5 423 aa17.28■□□□□ 0.36
SMN2-213ENST00000614240 PJA2O43164 708 aa17.27■□□□□ 0.36
SMN2-213ENST00000614240 DDAH2O95865 285 aa17.27■□□□□ 0.36
SMN2-213ENST00000614240 IGHEP01854 428 aa17.27■□□□□ 0.36
SMN2-213ENST00000614240 ALPPP05187 535 aa17.27■□□□□ 0.36
SMN2-213ENST00000614240 PTMAP06454 111 aaKnown RBP17.27■□□□□ 0.36
SMN2-213ENST00000614240 GSTM1P09488 218 aa17.27■□□□□ 0.36
SMN2-213ENST00000614240 SHMT2P34897 504 aa17.27■□□□□ 0.36
SMN2-213ENST00000614240 FOLR3P41439 243 aa17.27■□□□□ 0.36
SMN2-213ENST00000614240 GSTM4Q03013 218 aa17.27■□□□□ 0.36
SMN2-213ENST00000614240 SSPNQ14714 243 aa17.27■□□□□ 0.36
SMN2-213ENST00000614240 DENND5AQ6IQ26 1287 aa17.27■□□□□ 0.36
SMN2-213ENST00000614240 MRGPREQ86SM8 312 aa17.27■□□□□ 0.36
SMN2-213ENST00000614240 TRIM73Q86UV7 250 aa17.27■□□□□ 0.36
SMN2-213ENST00000614240 IQCKQ8N0W5 287 aa17.27■□□□□ 0.36
SMN2-213ENST00000614240 CLDN19Q8N6F1 224 aa17.27■□□□□ 0.36
SMN2-213ENST00000614240 CLEC1AQ8NC01 280 aa17.27■□□□□ 0.36
SMN2-213ENST00000614240 TSPY26PQ9H489 355 aa17.27■□□□□ 0.36
SMN2-213ENST00000614240 SMARCAL1Q9NZC9 954 aa17.27■□□□□ 0.36
SMN2-213ENST00000614240 NDOR1Q9UHB4 597 aa17.27■□□□□ 0.36
SMN2-213ENST00000614240 ASF1AQ9Y294 204 aa17.27■□□□□ 0.36
SMN2-213ENST00000614240 EFR3BQ9Y2G0 817 aa17.27■□□□□ 0.36
SMN2-213ENST00000614240 TDRKHQ9Y2W6 561 aaKnown RBP17.27■□□□□ 0.36
SMN2-213ENST00000614240 PTRH2Q9Y3E5 179 aaKnown RBP17.27■□□□□ 0.36
SMN2-213ENST00000614240 MED13Q9UHV7 2174 aa17.27■□□□□ 0.36
SMN2-213ENST00000614240 ICE1Q9Y2F5 2266 aa17.27■□□□□ 0.35
SMN2-213ENST00000614240 IGLV3-16A0A075B6K0 115 aa17.26■□□□□ 0.35
SMN2-213ENST00000614240 KRT86O43790 486 aa17.26■□□□□ 0.35
SMN2-213ENST00000614240 KLHL41O60662 606 aa17.26■□□□□ 0.35
SMN2-213ENST00000614240 TJP3O95049 919 aa17.26■□□□□ 0.35
SMN2-213ENST00000614240 CD63P08962 238 aa17.26■□□□□ 0.35
SMN2-213ENST00000614240 CBSLP0DN79 551 aa17.26■□□□□ 0.35
SMN2-213ENST00000614240 UGT2B7P16662 529 aa17.26■□□□□ 0.35
SMN2-213ENST00000614240 TPH1P17752 444 aa17.26■□□□□ 0.35
SMN2-213ENST00000614240 CTNNA1P35221 906 aaKnown RBP17.26■□□□□ 0.35
SMN2-213ENST00000614240 CBSP35520 551 aa17.26■□□□□ 0.35
SMN2-213ENST00000614240 CACNG1Q06432 222 aa17.26■□□□□ 0.35
SMN2-213ENST00000614240 TBX2Q13207 712 aaPredicted RBP17.26■□□□□ 0.35
SMN2-213ENST00000614240 BRD3Q15059 726 aa17.26■□□□□ 0.35
SMN2-213ENST00000614240 DEFB110Q30KQ9 67 aa17.26■□□□□ 0.35
SMN2-213ENST00000614240 LYPLAL1Q5VWZ2 237 aa17.26■□□□□ 0.35
SMN2-213ENST00000614240 UNC5AQ6ZN44 842 aa17.26■□□□□ 0.35
SMN2-213ENST00000614240 ARHGEF18Q6ZSZ5 1173 aa17.26■□□□□ 0.35
SMN2-213ENST00000614240 OR5AR1Q8NGP9 310 aa17.26■□□□□ 0.35
SMN2-213ENST00000614240 C19orf60Q96EN9 201 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms