RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 IMPDH1P20839 514 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 ACADLP28330 430 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 AGTR2P50052 363 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 ALDH18A1P54886 795 aaKnown RBP17.12■□□□□ 0.33
SREK1-216ENST00000612404 HERVK_113P63132 956 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 SLC30A9Q6PML9 568 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 CEP68Q76N32 757 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 ERVK-6Q9BXR3 956 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 EPN3Q9H201 632 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 TCEAL2Q9H3H9 227 aaPredicted RBP17.12■□□□□ 0.33
SREK1-216ENST00000612404 ZNF395Q9H8N7 513 aaPredicted RBP17.12■□□□□ 0.33
SREK1-216ENST00000612404 FGFR1OP2Q9NVK5 253 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 TRNAU1APQ9NX07 287 aaKnown RBP17.12■□□□□ 0.33
SREK1-216ENST00000612404 CIDEBQ9UHD4 219 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 KLF15Q9UIH9 416 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 ASF1AQ9Y294 204 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 ZFC3H1O60293 1989 aaKnown RBP17.12■□□□□ 0.33
SREK1-216ENST00000612404 EEF1DP29692 281 aaKnown RBP17.12■□□□□ 0.33
SREK1-216ENST00000612404 ACTR1BP42025 376 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 SLC1A6P48664 564 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 AFF3P51826 1226 aaKnown RBP17.12■□□□□ 0.33
SREK1-216ENST00000612404 ACTR1AP61163 376 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 PHACTR4Q8IZ21 702 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 PHC3Q8NDX5 983 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 TFGQ92734 400 aaPredicted RBP17.12■□□□□ 0.33
SREK1-216ENST00000612404 ESAMQ96AP7 390 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 RMDN2Q96LZ7 410 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 PITPNM3Q9BZ71 974 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 ZDHHC5Q9C0B5 715 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 PRDM8Q9NQV8 689 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 WDR37Q9Y2I8 494 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 LRP4O75096 1905 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 FRYLO94915 3013 aa17.12■□□□□ 0.33
SREK1-216ENST00000612404 LRRC14BA6NHZ5 514 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 ITM2AO43736 263 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 KLK8O60259 260 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 LYPLA1O75608 230 aaPredicted RBP17.11■□□□□ 0.33
SREK1-216ENST00000612404 SUPT7LO94864 414 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 C1orf105O95561 183 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 ANXA5P08758 320 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 CTSEP14091 401 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 BLKP51451 505 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 C21orf59P57076 290 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 ILF3Q12906 894 aaKnown RBP eCLIP17.11■□□□□ 0.33
SREK1-216ENST00000612404 SETDB1Q15047 1291 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 ANGPT1Q15389 498 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 C18orf21Q32NC0 220 aaPredicted RBP17.11■□□□□ 0.33
SREK1-216ENST00000612404 PLK5Q496M5 336 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.11■□□□□ 0.33
SREK1-216ENST00000612404 ZNF678Q5SXM1 525 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 RPS27LQ71UM5 84 aaKnown RBP17.11■□□□□ 0.33
SREK1-216ENST00000612404 SPATS2Q86XZ4 545 aaKnown RBP17.11■□□□□ 0.33
SREK1-216ENST00000612404 PDPRQ8NCN5 879 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 OR6Y1Q8NGX8 325 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 PPP4R1Q8TF05 950 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 THAP1Q9NVV9 213 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 WWOXQ9NZC7 414 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 PRR19A6NJB7 356 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 JUNDP17535 347 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 CCR10P46092 362 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 ABCE1P61221 599 aaKnown RBP17.11■□□□□ 0.33
SREK1-216ENST00000612404 CCSMST1Q4G0I0 132 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 UNC5DQ6UXZ4 953 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 CPLX4Q7Z7G2 160 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 RASGRP3Q8IV61 690 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 SKA1Q96BD8 255 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 L3HYPDHQ96EM0 354 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 C12orf66Q96MD2 445 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 C20orf27Q9GZN8 174 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 TBC1D29Q9UFV1 150 aa17.11■□□□□ 0.33
SREK1-216ENST00000612404 TDRD6O60522 2096 aaKnown RBP17.1■□□□□ 0.33
SREK1-216ENST00000612404 TMEM114B3SHH9 223 aa17.1■□□□□ 0.33
SREK1-216ENST00000612404 STX16-NPEPL1H3BU86 382 aa17.1■□□□□ 0.33
SREK1-216ENST00000612404 STX16O14662 325 aa17.1■□□□□ 0.33
SREK1-216ENST00000612404 SNNO75324 88 aaPredicted RBP17.1■□□□□ 0.33
SREK1-216ENST00000612404 HSPA4LO95757 839 aa17.1■□□□□ 0.33
SREK1-216ENST00000612404 SP9P0CG40 484 aa17.1■□□□□ 0.33
SREK1-216ENST00000612404 AP1S2P56377 157 aa17.1■□□□□ 0.33
SREK1-216ENST00000612404 RCN2Q14257 317 aa17.1■□□□□ 0.33
SREK1-216ENST00000612404 UAP1L1Q3KQV9 507 aa17.1■□□□□ 0.33
SREK1-216ENST00000612404 SULT1C3Q6IMI6 304 aa17.1■□□□□ 0.33
SREK1-216ENST00000612404 OR5AR1Q8NGP9 310 aa17.1■□□□□ 0.33
SREK1-216ENST00000612404 RHBDF1Q96CC6 855 aa17.1■□□□□ 0.33
SREK1-216ENST00000612404 IMP3Q9NV31 184 aaKnown RBP17.1■□□□□ 0.33
SREK1-216ENST00000612404 ZSCAN32Q9NX65 697 aa17.1■□□□□ 0.33
SREK1-216ENST00000612404 APOBEC3BQ9UH17 382 aaKnown RBP17.1■□□□□ 0.33
SREK1-216ENST00000612404 VILLO15195 856 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 GNSP15586 552 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 HSPA7P48741 367 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 NXPH1P58417 271 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 CDKL1Q00532 357 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 ZNF528Q3MIS6 628 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 UNC50Q53HI1 259 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 CAPRIN2Q6IMN6 1127 aaKnown RBP17.09■□□□□ 0.33
SREK1-216ENST00000612404 DUS1LQ6P1R4 473 aaKnown RBP17.09■□□□□ 0.33
SREK1-216ENST00000612404 TTC23LQ6PF05 361 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 INSM2Q96T92 566 aaPredicted RBP17.09■□□□□ 0.33
SREK1-216ENST00000612404 SHCBP1LQ9BZQ2 653 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 DRC3Q9H069 523 aa17.09■□□□□ 0.33
SREK1-216ENST00000612404 PSD3Q9NYI0 1048 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms