RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 SLC6A14Q9UN76 642 aa22.37■■□□□ 1.17
IRF3-227ENST00000600911 WDR87Q6ZQQ6 2873 aa22.36■■□□□ 1.17
IRF3-227ENST00000600911 NCF1BA6NI72 391 aaPredicted RBP22.36■■□□□ 1.17
IRF3-227ENST00000600911 NCF1CA8MVU1 366 aaPredicted RBP22.36■■□□□ 1.17
IRF3-227ENST00000600911 YY2O15391 372 aa22.36■■□□□ 1.17
IRF3-227ENST00000600911 AQP9O43315 295 aa22.36■■□□□ 1.17
IRF3-227ENST00000600911 KERAO60938 352 aa22.36■■□□□ 1.17
IRF3-227ENST00000600911 C1orf105O95561 183 aa22.36■■□□□ 1.17
IRF3-227ENST00000600911 SLC35G4P0C7Q5 338 aa22.36■■□□□ 1.17
IRF3-227ENST00000600911 NCF1P14598 390 aaPredicted RBP22.36■■□□□ 1.17
IRF3-227ENST00000600911 RPE65Q16518 533 aa22.36■■□□□ 1.17
IRF3-227ENST00000600911 DEFB133Q30KQ1 61 aa22.36■■□□□ 1.17
IRF3-227ENST00000600911 ABRAXAS1Q6UWZ7 409 aa22.36■■□□□ 1.17
IRF3-227ENST00000600911 KANSL1Q7Z3B3 1105 aa22.36■■□□□ 1.17
IRF3-227ENST00000600911 TFGQ92734 400 aaPredicted RBP22.36■■□□□ 1.17
IRF3-227ENST00000600911 MRPL57Q9BQC6 102 aaKnown RBP22.36■■□□□ 1.17
IRF3-227ENST00000600911 MRPL46Q9H2W6 279 aaKnown RBP22.36■■□□□ 1.17
IRF3-227ENST00000600911 PCOLCE2Q9UKZ9 415 aa22.36■■□□□ 1.17
IRF3-227ENST00000600911 KLHL33A6NCF5 533 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 LRRC14BA6NHZ5 514 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 DLX3O60479 287 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 HNRNPKP61978 463 aaKnown RBP eCLIP22.35■■□□□ 1.17
IRF3-227ENST00000600911 CES4AQ5XG92 561 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 LCA5Q86VQ0 697 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 GATAD2AQ86YP4 633 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 RHEBL1Q8TAI7 183 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 CEP76Q8TAP6 659 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 TSNARE1Q96NA8 513 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 SLC12A9Q9BXP2 914 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 IQCGQ9H095 443 aaKnown RBP22.35■■□□□ 1.17
IRF3-227ENST00000600911 GAREM1Q9H706 876 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 IMP3Q9NV31 184 aaKnown RBP22.35■■□□□ 1.17
IRF3-227ENST00000600911 RNF112Q9ULX5 631 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 PLAGL1Q9UM63 463 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 ASB1Q9Y576 335 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 MUC6Q6W4X9 2439 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 A0A1B0GTQ1 180 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 WDR91A4D1P6 747 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 TM9SF1O15321 606 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 ZWINTO95229 277 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 GUCA1CO95843 209 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 F3P13726 295 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 KCNA4P22459 653 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 RXRGP48443 463 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 PLOD1Q02809 727 aaPredicted RBP22.35■■□□□ 1.17
IRF3-227ENST00000600911 PRKG2Q13237 762 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 TGFBIQ15582 683 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 KLC3Q6P597 504 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 WASH2PQ6VEQ5 465 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 ESAMQ96AP7 390 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 WASH6PQ9NQA3 447 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 SPASTQ9UBP0 616 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 ASF1AQ9Y294 204 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 OARD1Q9Y530 152 aa22.35■■□□□ 1.17
IRF3-227ENST00000600911 B4DGG1 531 aa22.34■■□□□ 1.17
IRF3-227ENST00000600911 EPHA8P29322 1005 aaPredicted RBP22.34■■□□□ 1.17
IRF3-227ENST00000600911 SLC19A1P41440 591 aa22.34■■□□□ 1.17
IRF3-227ENST00000600911 SLC18A1P54219 525 aa22.34■■□□□ 1.17
IRF3-227ENST00000600911 CCDC153Q494R4 210 aa22.34■■□□□ 1.17
IRF3-227ENST00000600911 LAIR1Q6GTX8 287 aa22.34■■□□□ 1.17
IRF3-227ENST00000600911 ADAMTSL2Q86TH1 951 aa22.34■■□□□ 1.17
IRF3-227ENST00000600911 GPSM1Q86YR5 675 aa22.34■■□□□ 1.17
IRF3-227ENST00000600911 CCDC63Q8NA47 563 aa22.34■■□□□ 1.17
IRF3-227ENST00000600911 FAM46DQ8NEK8 389 aa22.34■■□□□ 1.17
IRF3-227ENST00000600911 STAG3L4Q8TBR4 150 aa22.34■■□□□ 1.17
IRF3-227ENST00000600911 JPH3Q8WXH2 748 aaPredicted RBP22.34■■□□□ 1.17
IRF3-227ENST00000600911 COPG2Q9UBF2 871 aa22.34■■□□□ 1.17
IRF3-227ENST00000600911 PCDHGA5Q9Y5G8 931 aa22.34■■□□□ 1.17
IRF3-227ENST00000600911 A8MT66 165 aa22.33■■□□□ 1.17
IRF3-227ENST00000600911 SUPT3HB4E1H0 165 aa22.33■■□□□ 1.17
IRF3-227ENST00000600911 ARHGAP33O14559 1287 aa22.33■■□□□ 1.17
IRF3-227ENST00000600911 SUPT3HO75486 399 aa22.33■■□□□ 1.17
IRF3-227ENST00000600911 C8GP07360 202 aa22.33■■□□□ 1.17
IRF3-227ENST00000600911 RBP1P09455 135 aa22.33■■□□□ 1.17
IRF3-227ENST00000600911 ALDH3A1P30838 453 aa22.33■■□□□ 1.17
IRF3-227ENST00000600911 AGTR2P50052 363 aa22.33■■□□□ 1.17
IRF3-227ENST00000600911 ELOCQ15369 112 aa22.33■■□□□ 1.17
IRF3-227ENST00000600911 FAM219BQ5XKK7 198 aa22.33■■□□□ 1.17
IRF3-227ENST00000600911 IYDQ6PHW0 289 aa22.33■■□□□ 1.17
IRF3-227ENST00000600911 RPS27LQ71UM5 84 aaKnown RBP22.33■■□□□ 1.17
IRF3-227ENST00000600911 C10orf107Q8IVU9 208 aa22.33■■□□□ 1.17
IRF3-227ENST00000600911 ATOH1Q92858 354 aaPredicted RBP22.33■■□□□ 1.17
IRF3-227ENST00000600911 IL17FQ96PD4 163 aa22.33■■□□□ 1.17
IRF3-227ENST00000600911 PKP4Q99569 1192 aa22.33■■□□□ 1.17
IRF3-227ENST00000600911 HGH1Q9BTY7 390 aa22.33■■□□□ 1.17
IRF3-227ENST00000600911 PARVBQ9HBI1 364 aa22.33■■□□□ 1.17
IRF3-227ENST00000600911 GMEB2Q9UKD1 530 aa22.33■■□□□ 1.17
IRF3-227ENST00000600911 RAB23Q9ULC3 237 aa22.33■■□□□ 1.17
IRF3-227ENST00000600911 TAPBPO15533 448 aa22.32■■□□□ 1.16
IRF3-227ENST00000600911 FFAR2O15552 330 aa22.32■■□□□ 1.16
IRF3-227ENST00000600911 MTHFD1P11586 935 aaKnown RBP22.32■■□□□ 1.16
IRF3-227ENST00000600911 ENGP17813 658 aa22.32■■□□□ 1.16
IRF3-227ENST00000600911 SERPINB4P48594 390 aa22.32■■□□□ 1.16
IRF3-227ENST00000600911 SF3A2Q15428 464 aaKnown RBP22.32■■□□□ 1.16
IRF3-227ENST00000600911 UNC5DQ6UXZ4 953 aa22.32■■□□□ 1.16
IRF3-227ENST00000600911 ZYG11AQ6WRX3 759 aa22.32■■□□□ 1.16
IRF3-227ENST00000600911 ATG14Q6ZNE5 492 aa22.32■■□□□ 1.16
IRF3-227ENST00000600911 SLC37A2Q8TED4 501 aa22.32■■□□□ 1.16
IRF3-227ENST00000600911 ZDHHC1Q8WTX9 485 aa22.32■■□□□ 1.16
IRF3-227ENST00000600911 PHF21BQ96EK2 531 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms