RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 ALOX5P09917 674 aa18.01■□□□□ 0.47
UPF1-210ENST00000600689 IGFBP5P24593 272 aa18.01■□□□□ 0.47
UPF1-210ENST00000600689 GPR15P49685 360 aa18.01■□□□□ 0.47
UPF1-210ENST00000600689 CYP4F2P78329 520 aa18.01■□□□□ 0.47
UPF1-210ENST00000600689 CYP4F3Q08477 520 aa18.01■□□□□ 0.47
UPF1-210ENST00000600689 ZNF235Q14590 738 aa18.01■□□□□ 0.47
UPF1-210ENST00000600689 NETO1Q8TDF5 533 aa18.01■□□□□ 0.47
UPF1-210ENST00000600689 LGALS12Q96DT0 336 aa18.01■□□□□ 0.47
UPF1-210ENST00000600689 CCDC97Q96F63 343 aaPredicted RBP18.01■□□□□ 0.47
UPF1-210ENST00000600689 CDKN2AIPNLQ96HQ2 116 aa18.01■□□□□ 0.47
UPF1-210ENST00000600689 GABRQQ9UN88 632 aa18.01■□□□□ 0.47
UPF1-210ENST00000600689 Q9Y3F1 56 aa18.01■□□□□ 0.47
UPF1-210ENST00000600689 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.01■□□□□ 0.47
UPF1-210ENST00000600689 ITIH1P19827 911 aa18.01■□□□□ 0.47
UPF1-210ENST00000600689 CD52P31358 61 aa18.01■□□□□ 0.47
UPF1-210ENST00000600689 SETMARQ53H47 684 aaPredicted RBP18.01■□□□□ 0.47
UPF1-210ENST00000600689 COQ5Q5HYK3 327 aa18.01■□□□□ 0.47
UPF1-210ENST00000600689 UBE2UQ5VVX9 321 aa18.01■□□□□ 0.47
UPF1-210ENST00000600689 TRIB2Q92519 343 aa18.01■□□□□ 0.47
UPF1-210ENST00000600689 ZNF641Q96N77 438 aaPredicted RBP18.01■□□□□ 0.47
UPF1-210ENST00000600689 SPON2Q9BUD6 331 aa18.01■□□□□ 0.47
UPF1-210ENST00000600689 APOL5Q9BWW9 433 aa18.01■□□□□ 0.47
UPF1-210ENST00000600689 OSER1Q9NX31 292 aa18.01■□□□□ 0.47
UPF1-210ENST00000600689 ABI2Q9NYB9 513 aaPredicted RBP18.01■□□□□ 0.47
UPF1-210ENST00000600689 IL37Q9NZH6 218 aa18.01■□□□□ 0.47
UPF1-210ENST00000600689 ELOVL7A1L3X0 281 aa18■□□□□ 0.47
UPF1-210ENST00000600689 E5RI56 91 aa18■□□□□ 0.47
UPF1-210ENST00000600689 GPR182O15218 404 aa18■□□□□ 0.47
UPF1-210ENST00000600689 DUSP11O75319 330 aaKnown RBP18■□□□□ 0.47
UPF1-210ENST00000600689 RPP40O75818 363 aaKnown RBP18■□□□□ 0.47
UPF1-210ENST00000600689 GABARAPO95166 117 aa18■□□□□ 0.47
UPF1-210ENST00000600689 IGHA2P01877 340 aa18■□□□□ 0.47
UPF1-210ENST00000600689 RPS17P08708 135 aaKnown RBP18■□□□□ 0.47
UPF1-210ENST00000600689 ST13P50502 369 aaKnown RBP18■□□□□ 0.47
UPF1-210ENST00000600689 STC1P52823 247 aa18■□□□□ 0.47
UPF1-210ENST00000600689 PON2Q15165 354 aa18■□□□□ 0.47
UPF1-210ENST00000600689 BCL2A1Q16548 175 aa18■□□□□ 0.47
UPF1-210ENST00000600689 ZRANB3Q5FWF4 1079 aa18■□□□□ 0.47
UPF1-210ENST00000600689 RSBN1Q5VWQ0 802 aaPredicted RBP18■□□□□ 0.47
UPF1-210ENST00000600689 Q6ZPB1 254 aaPredicted RBP18■□□□□ 0.47
UPF1-210ENST00000600689 TAS2R42Q7RTR8 314 aa18■□□□□ 0.47
UPF1-210ENST00000600689 CYP4Z1Q86W10 505 aa18■□□□□ 0.47
UPF1-210ENST00000600689 GATAD2AQ86YP4 633 aa18■□□□□ 0.47
UPF1-210ENST00000600689 OR10T2Q8NGX3 314 aa18■□□□□ 0.47
UPF1-210ENST00000600689 ISG20Q96AZ6 181 aaKnown RBP18■□□□□ 0.47
UPF1-210ENST00000600689 SYTL2Q9HCH5 934 aa18■□□□□ 0.47
UPF1-210ENST00000600689 MED16Q9Y2X0 877 aa18■□□□□ 0.47
UPF1-210ENST00000600689 SPO11Q9Y5K1 396 aa18■□□□□ 0.47
UPF1-210ENST00000600689 MFN2O95140 757 aa18■□□□□ 0.47
UPF1-210ENST00000600689 CD6P30203 668 aa18■□□□□ 0.47
UPF1-210ENST00000600689 ZNF691Q5VV52 312 aa18■□□□□ 0.47
UPF1-210ENST00000600689 CEP68Q76N32 757 aa18■□□□□ 0.47
UPF1-210ENST00000600689 OR4F6Q8NGB9 312 aa18■□□□□ 0.47
UPF1-210ENST00000600689 ARRDC2Q8TBH0 407 aa18■□□□□ 0.47
UPF1-210ENST00000600689 IGSF8Q969P0 613 aa18■□□□□ 0.47
UPF1-210ENST00000600689 RPRD1AQ96P16 312 aaPredicted RBP18■□□□□ 0.47
UPF1-210ENST00000600689 RTP3Q9BQQ7 232 aa18■□□□□ 0.47
UPF1-210ENST00000600689 DDX28Q9NUL7 540 aaKnown RBP18■□□□□ 0.47
UPF1-210ENST00000600689 CDH9Q9ULB4 789 aa18■□□□□ 0.47
UPF1-210ENST00000600689 GMPPBQ9Y5P6 360 aa18■□□□□ 0.47
UPF1-210ENST00000600689 MANSC4A6NHS7 340 aaPredicted RBP18■□□□□ 0.47
UPF1-210ENST00000600689 TTC34A8MYJ7 566 aa18■□□□□ 0.47
UPF1-210ENST00000600689 EFCAB9A8MZ26 197 aa18■□□□□ 0.47
UPF1-210ENST00000600689 ASNA1O43681 348 aa18■□□□□ 0.47
UPF1-210ENST00000600689 SSX4O60224 188 aa18■□□□□ 0.47
UPF1-210ENST00000600689 LRATO95237 230 aa18■□□□□ 0.47
UPF1-210ENST00000600689 CYP11A1P05108 521 aa18■□□□□ 0.47
UPF1-210ENST00000600689 THPOP40225 353 aa18■□□□□ 0.47
UPF1-210ENST00000600689 PWP1Q13610 501 aa18■□□□□ 0.47
UPF1-210ENST00000600689 CBX2Q14781 532 aaPredicted RBP18■□□□□ 0.47
UPF1-210ENST00000600689 DDR2Q16832 855 aa18■□□□□ 0.47
UPF1-210ENST00000600689 XKR7Q5GH72 579 aa18■□□□□ 0.47
UPF1-210ENST00000600689 VARS2Q5ST30 1063 aaKnown RBP18■□□□□ 0.47
UPF1-210ENST00000600689 MFSD4BQ5TF39 518 aa18■□□□□ 0.47
UPF1-210ENST00000600689 STEAP3Q658P3 488 aa18■□□□□ 0.47
UPF1-210ENST00000600689 CES5AQ6NT32 575 aa18■□□□□ 0.47
UPF1-210ENST00000600689 PIANPQ8IYJ0 282 aa18■□□□□ 0.47
UPF1-210ENST00000600689 SLC13A3Q8WWT9 602 aa18■□□□□ 0.47
UPF1-210ENST00000600689 ZBED2Q9BTP6 218 aa18■□□□□ 0.47
UPF1-210ENST00000600689 BRINP2Q9C0B6 783 aa18■□□□□ 0.47
UPF1-210ENST00000600689 REXO4Q9GZR2 422 aaKnown RBP18■□□□□ 0.47
UPF1-210ENST00000600689 ARNT2Q9HBZ2 717 aa18■□□□□ 0.47
UPF1-210ENST00000600689 ZIM2Q9NZV7 527 aa18■□□□□ 0.47
UPF1-210ENST00000600689 TRMT6Q9UJA5 497 aaKnown RBP18■□□□□ 0.47
UPF1-210ENST00000600689 SLC22A1O15245 554 aa17.99■□□□□ 0.47
UPF1-210ENST00000600689 EFNA1P20827 205 aaPredicted RBP17.99■□□□□ 0.47
UPF1-210ENST00000600689 PCSK1P29120 753 aa17.99■□□□□ 0.47
UPF1-210ENST00000600689 MADCAM1Q13477 382 aa17.99■□□□□ 0.47
UPF1-210ENST00000600689 UPP1Q16831 310 aa17.99■□□□□ 0.47
UPF1-210ENST00000600689 DESI1Q6ICB0 168 aa17.99■□□□□ 0.47
UPF1-210ENST00000600689 PSAPL1Q6NUJ1 521 aa17.99■□□□□ 0.47
UPF1-210ENST00000600689 SCD5Q86SK9 330 aa17.99■□□□□ 0.47
UPF1-210ENST00000600689 ADHFE1Q8IWW8 467 aa17.99■□□□□ 0.47
UPF1-210ENST00000600689 DCSTAMPQ9H295 470 aa17.99■□□□□ 0.47
UPF1-210ENST00000600689 BOLA1Q9Y3E2 137 aa17.99■□□□□ 0.47
UPF1-210ENST00000600689 UPK3BL1B0FP48 263 aa17.99■□□□□ 0.47
UPF1-210ENST00000600689 UPK3BL2E5RIL1 263 aa17.99■□□□□ 0.47
UPF1-210ENST00000600689 H0Y626 953 aa17.99■□□□□ 0.47
UPF1-210ENST00000600689 RAD51BO15315 384 aa17.99■□□□□ 0.47
UPF1-210ENST00000600689 KCNK2O95069 426 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms