RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 KLHL35Q6PF15 583 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 ZDHHC24Q6UX98 284 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 CAPN12Q6ZSI9 719 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 OOSP2Q86WS3 158 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 FAM129CQ86XR2 697 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 TBC1D21Q8IYX1 336 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 ZBED8Q8IZ13 594 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 NOA1Q8NC60 698 aaKnown RBP14.79□□□□□ -0.04
LIG1-219ENST00000600055 USP7Q93009 1102 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 PMEPA1Q969W9 287 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 PPM1MQ96MI6 270 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 RAB33BQ9H082 229 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 TRIT1Q9H3H1 467 aaKnown RBP14.79□□□□□ -0.04
LIG1-219ENST00000600055 SRMSQ9H3Y6 488 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 SAYSD1Q9NPB0 183 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 PPANQ9NQ55 473 aaKnown RBP14.79□□□□□ -0.04
LIG1-219ENST00000600055 THSD1Q9NS62 852 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 CIDEBQ9UHD4 219 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 PLAGL1Q9UM63 463 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 RUVBL2Q9Y230 463 aaKnown RBP14.79□□□□□ -0.04
LIG1-219ENST00000600055 PIKFYVEQ9Y2I7 2098 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 TDRKHQ9Y2W6 561 aaKnown RBP14.79□□□□□ -0.04
LIG1-219ENST00000600055 MED16Q9Y2X0 877 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 E5RI56 91 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 BTN3A3O00478 584 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 KPNA5O15131 536 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 PRAMEF10O60809 474 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 RASSF9O75901 435 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 AHSGP02765 367 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 SLC5A2P31639 672 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 CLCN7P51798 805 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 ERVPABLB-1P60509 514 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 CBLBQ13191 982 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 GBX1Q14549 363 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 ACSBG2Q5FVE4 666 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 PLEKHS1Q5SXH7 462 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 TEDDM1Q5T9Z0 273 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 CACHD1Q5VU97 1274 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 FBXO38Q6PIJ6 1188 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 CLEC14AQ86T13 490 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 CNTN4Q8IWV2 1026 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 MMGT1Q8N4V1 131 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 ZBTB2Q8N680 514 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 BMPERQ8N8U9 685 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 LMNTD1Q8N9Z9 388 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 SIDT2Q8NBJ9 832 aaKnown RBP14.78□□□□□ -0.04
LIG1-219ENST00000600055 OR5K2Q8NHB8 316 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 SNIP1Q8TAD8 396 aaKnown RBP14.78□□□□□ -0.04
LIG1-219ENST00000600055 FBXO25Q8TCJ0 367 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 ZDHHC12Q96GR4 267 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 NAF1Q96HR8 494 aaKnown RBP14.78□□□□□ -0.04
LIG1-219ENST00000600055 DCBLD2Q96PD2 775 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 NDNQ99608 321 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 MAP3K3Q99759 626 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 TFB2MQ9H5Q4 396 aaKnown RBP14.78□□□□□ -0.04
LIG1-219ENST00000600055 FOXJ2Q9P0K8 574 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 ICKQ9UPZ9 632 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 NFS1Q9Y697 457 aa14.78□□□□□ -0.04
LIG1-219ENST00000600055 IGHV5-51A0A0C4DH38 117 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 CTAGE15A4D2H0 777 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 C9orf172C9J069 976 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 BTN3A1O00481 513 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 ANKRD34CP0C6C1 535 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 CTAGE8P0CG41 777 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 KPNA2P52292 529 aaKnown RBP14.77□□□□□ -0.05
LIG1-219ENST00000600055 SH3BP2P78314 561 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 GUCY2DQ02846 1103 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 CUL1Q13616 776 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 TUBB2AQ13885 445 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 DNTTIP2Q5QJE6 756 aaKnown RBP14.77□□□□□ -0.05
LIG1-219ENST00000600055 ARMC6Q6NXE6 501 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 PRSS42Q7Z5A4 293 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 CTAGE6Q86UF2 777 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 AMIGO1Q86WK6 493 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 CTAGE4Q8IX94 777 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 ADGRF3Q8IZF5 1079 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 MNS1Q8NEH6 495 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 GIMAP7Q8NHV1 300 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 GSDMBQ8TAX9 411 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 PYROXD1Q8WU10 500 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 SKA2Q8WVK7 121 aaPredicted RBP14.77□□□□□ -0.05
LIG1-219ENST00000600055 CTRCQ99895 268 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 AARSD1Q9BTE6 412 aaKnown RBP14.77□□□□□ -0.05
LIG1-219ENST00000600055 TUBB2BQ9BVA1 445 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 CCDC68Q9H2F9 335 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 ZNF768Q9H5H4 540 aaKnown RBP14.77□□□□□ -0.05
LIG1-219ENST00000600055 LATS2Q9NRM7 1088 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 SLC39A1Q9NY26 324 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 POLG2Q9UHN1 485 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 ACACBO00763 2458 aa14.77□□□□□ -0.05
LIG1-219ENST00000600055 GSAPA4D1B5 854 aa14.76□□□□□ -0.05
LIG1-219ENST00000600055 KRT87PA6NCN2 255 aa14.76□□□□□ -0.05
LIG1-219ENST00000600055 EIF3HO15372 352 aaKnown RBP eCLIP14.76□□□□□ -0.05
LIG1-219ENST00000600055 PIAS1O75925 651 aa14.76□□□□□ -0.05
LIG1-219ENST00000600055 SSTR1P30872 391 aa14.76□□□□□ -0.05
LIG1-219ENST00000600055 EIF2S3P41091 472 aaKnown RBP14.76□□□□□ -0.05
LIG1-219ENST00000600055 MLLT3P42568 568 aaPredicted RBP14.76□□□□□ -0.05
LIG1-219ENST00000600055 BDKRB1P46663 353 aa14.76□□□□□ -0.05
LIG1-219ENST00000600055 PCBP4P57723 403 aaKnown RBP14.76□□□□□ -0.05
LIG1-219ENST00000600055 TIAL1Q01085 375 aaKnown RBP eCLIP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms