RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 PTGR1Q14914 329 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 FNDC3BQ53EP0 1204 aaKnown RBP14.14□□□□□ -0.15
VRK3-217ENST00000599538 PLEKHS1Q5SXH7 462 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 TRIM74Q86UV6 250 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 KIAA2013Q8IYS2 634 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 RGL4Q8IZJ4 473 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 WFIKKN2Q8TEU8 576 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 SMARCD2Q92925 531 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 AP2M1Q96CW1 435 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 TMEM74Q96NL1 305 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 ATG10Q9H0Y0 220 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 SLC32A1Q9H598 525 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 PFDN4Q9NQP4 134 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 ZIM2Q9NZV7 527 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 C6orf203Q9P0P8 240 aaPredicted RBP14.14□□□□□ -0.15
VRK3-217ENST00000599538 ZNF490Q9ULM2 529 aaPredicted RBP14.14□□□□□ -0.15
VRK3-217ENST00000599538 USP22Q9UPT9 525 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 PCDHA9Q9Y5H5 950 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 AK5Q9Y6K8 562 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 EYSQ5T1H1 3165 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 MANBAO00462 879 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 SOD1P00441 154 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 C8BP07358 591 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 EBLN1P0CF75 366 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 FSHRP23945 695 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 FCARP24071 287 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 GGT5P36269 586 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 VASPP50552 380 aaPredicted RBP14.14□□□□□ -0.15
VRK3-217ENST00000599538 NEK2P51955 445 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 PLIN5Q00G26 463 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 RHDQ02161 417 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 CCSMST1Q4G0I0 132 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 TANGO2Q6ICL3 276 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 PDE12Q6L8Q7 609 aaKnown RBP14.14□□□□□ -0.15
VRK3-217ENST00000599538 ZFP1Q6P2D0 407 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 ZFAND4Q86XD8 727 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 TMEM102Q8N9M5 508 aaPredicted RBP14.14□□□□□ -0.15
VRK3-217ENST00000599538 PIP4K2CQ8TBX8 421 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 GLYATL1Q969I3 302 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 TMEM125Q96AQ2 219 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 LRIG1Q96JA1 1093 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 HOPXQ9BPY8 73 aaPredicted RBP14.14□□□□□ -0.15
VRK3-217ENST00000599538 ZSCAN5AQ9BUG6 496 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 IGFLR1Q9H665 355 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 ZFP14Q9HCL3 533 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 DEC1Q9P2X7 70 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 SLC22A14Q9Y267 594 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 FAM234BA2RU67 622 aa14.13□□□□□ -0.15
VRK3-217ENST00000599538 CFAP99D6REC4 459 aa14.13□□□□□ -0.15
VRK3-217ENST00000599538 RFXAPO00287 272 aa14.13□□□□□ -0.15
VRK3-217ENST00000599538 EIF3FO00303 357 aaPredicted RBP14.13□□□□□ -0.15
VRK3-217ENST00000599538 ULK1O75385 1050 aa14.13□□□□□ -0.15
VRK3-217ENST00000599538 EEDO75530 441 aaKnown RBP14.13□□□□□ -0.15
VRK3-217ENST00000599538 WDR47O94967 919 aa14.13□□□□□ -0.15
VRK3-217ENST00000599538 C8GP07360 202 aa14.13□□□□□ -0.15
VRK3-217ENST00000599538 MPC1LP0DKB6 136 aa14.13□□□□□ -0.15
VRK3-217ENST00000599538 ITPKAP23677 461 aa14.13□□□□□ -0.15
VRK3-217ENST00000599538 KLC1Q07866 573 aa14.13□□□□□ -0.15
VRK3-217ENST00000599538 TRAP1Q12931 704 aaKnown RBP14.13□□□□□ -0.15
VRK3-217ENST00000599538 ABRQ12979 859 aa14.13□□□□□ -0.15
VRK3-217ENST00000599538 ZNF234Q14588 700 aa14.13□□□□□ -0.15
VRK3-217ENST00000599538 ZNF284Q2VY69 593 aa14.13□□□□□ -0.15
VRK3-217ENST00000599538 RAVER1Q8IY67 606 aaKnown RBP14.13□□□□□ -0.15
VRK3-217ENST00000599538 TSPEARQ8WU66 669 aa14.13□□□□□ -0.15
VRK3-217ENST00000599538 FAM129BQ96TA1 746 aa14.13□□□□□ -0.15
VRK3-217ENST00000599538 ACTR8Q9H981 624 aa14.13□□□□□ -0.15
VRK3-217ENST00000599538 GULP1Q9UBP9 304 aa14.13□□□□□ -0.15
VRK3-217ENST00000599538 TRPS1Q9UHF7 1281 aa14.13□□□□□ -0.15
VRK3-217ENST00000599538 BCAP29Q9UHQ4 241 aa14.13□□□□□ -0.15
VRK3-217ENST00000599538 HCN2Q9UL51 889 aa14.13□□□□□ -0.15
VRK3-217ENST00000599538 CNOT6Q9ULM6 557 aaKnown RBP14.13□□□□□ -0.15
VRK3-217ENST00000599538 SPTBN5Q9NRC6 3674 aaKnown RBP14.13□□□□□ -0.15
VRK3-217ENST00000599538 MUC22E2RYF6 1773 aaPredicted RBP14.13□□□□□ -0.15
VRK3-217ENST00000599538 COL4A3Q01955 1670 aa14.13□□□□□ -0.15
VRK3-217ENST00000599538 TCRBV3S1A0A5B6 114 aa14.12□□□□□ -0.15
VRK3-217ENST00000599538 WNT9AO14904 365 aa14.12□□□□□ -0.15
VRK3-217ENST00000599538 SLCO2B1O94956 709 aa14.12□□□□□ -0.15
VRK3-217ENST00000599538 NFATC1O95644 943 aa14.12□□□□□ -0.15
VRK3-217ENST00000599538 PDHA2P29803 388 aa14.12□□□□□ -0.15
VRK3-217ENST00000599538 GRIA3P42263 894 aa14.12□□□□□ -0.15
VRK3-217ENST00000599538 SLC6A12P48065 614 aa14.12□□□□□ -0.15
VRK3-217ENST00000599538 TMEM115Q12893 351 aaPredicted RBP14.12□□□□□ -0.15
VRK3-217ENST00000599538 PRKG2Q13237 762 aa14.12□□□□□ -0.15
VRK3-217ENST00000599538 HNRNPA1L2Q32P51 320 aaKnown RBP14.12□□□□□ -0.15
VRK3-217ENST00000599538 COQ5Q5HYK3 327 aa14.12□□□□□ -0.15
VRK3-217ENST00000599538 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.12□□□□□ -0.15
VRK3-217ENST00000599538 IRGCQ6NXR0 463 aa14.12□□□□□ -0.15
VRK3-217ENST00000599538 ERAP2Q6P179 960 aa14.12□□□□□ -0.15
VRK3-217ENST00000599538 IFNEQ86WN2 208 aa14.12□□□□□ -0.15
VRK3-217ENST00000599538 RNF175Q8N4F7 328 aa14.12□□□□□ -0.15
VRK3-217ENST00000599538 USP7Q93009 1102 aa14.12□□□□□ -0.15
VRK3-217ENST00000599538 LRGUKQ96M69 825 aa14.12□□□□□ -0.15
VRK3-217ENST00000599538 COQ10AQ96MF6 247 aa14.12□□□□□ -0.15
VRK3-217ENST00000599538 PBX4Q9BYU1 374 aa14.12□□□□□ -0.15
VRK3-217ENST00000599538 ACPTQ9BZG2 426 aa14.12□□□□□ -0.15
VRK3-217ENST00000599538 SEMA6AQ9H2E6 1030 aa14.12□□□□□ -0.15
VRK3-217ENST00000599538 MRPL40Q9NQ50 206 aaKnown RBP14.12□□□□□ -0.15
VRK3-217ENST00000599538 GID8Q9NWU2 228 aa14.12□□□□□ -0.15
VRK3-217ENST00000599538 NFKBIL1Q9UBC1 381 aaPredicted RBP14.12□□□□□ -0.15
VRK3-217ENST00000599538 EPS15L1Q9UBC2 864 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms