RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 AGAP3Q96P47 875 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 SLC29A3Q9BZD2 475 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 IL22Q9GZX6 179 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 ZMYND15Q9H091 742 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 APMAPQ9HDC9 416 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 TAAR2Q9P1P5 351 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 PDP2Q9P2J9 529 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 SOX13Q9UN79 622 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 FAM169AQ9Y6X4 670 aa12.61□□□□□ -0.39
SCAF1-202ENST00000595242 PRSS38A1L453 326 aa12.6□□□□□ -0.39
SCAF1-202ENST00000595242 CDC14CA4D256 554 aa12.6□□□□□ -0.39
SCAF1-202ENST00000595242 TRIM49D1C9J1S8 452 aa12.6□□□□□ -0.39
SCAF1-202ENST00000595242 F5H423 210 aaPredicted RBP12.6□□□□□ -0.39
SCAF1-202ENST00000595242 INPP4BO15327 924 aa12.6□□□□□ -0.39
SCAF1-202ENST00000595242 DLGAP3O95886 979 aa12.6□□□□□ -0.39
SCAF1-202ENST00000595242 HLA-DQB2P05538 268 aa12.6□□□□□ -0.39
SCAF1-202ENST00000595242 ETV4P43268 484 aa12.6□□□□□ -0.39
SCAF1-202ENST00000595242 SUOXP51687 545 aa12.6□□□□□ -0.39
SCAF1-202ENST00000595242 IL10RBQ08334 325 aa12.6□□□□□ -0.39
SCAF1-202ENST00000595242 MAP7Q14244 749 aa12.6□□□□□ -0.39
SCAF1-202ENST00000595242 SLC1A5Q15758 541 aa12.6□□□□□ -0.39
SCAF1-202ENST00000595242 SRLQ86TD4 932 aa12.6□□□□□ -0.39
SCAF1-202ENST00000595242 NRROSQ86YC3 692 aa12.6□□□□□ -0.39
SCAF1-202ENST00000595242 APLFQ8IW19 511 aaPredicted RBP12.6□□□□□ -0.39
SCAF1-202ENST00000595242 ACMSDQ8TDX5 336 aa12.6□□□□□ -0.39
SCAF1-202ENST00000595242 PTCD2Q8WV60 388 aaKnown RBP12.6□□□□□ -0.39
SCAF1-202ENST00000595242 ISL2Q96A47 359 aa12.6□□□□□ -0.39
SCAF1-202ENST00000595242 TRIM56Q9BRZ2 755 aaKnown RBP12.6□□□□□ -0.39
SCAF1-202ENST00000595242 KIFC1Q9BW19 673 aa12.6□□□□□ -0.39
SCAF1-202ENST00000595242 LGR4Q9BXB1 951 aa12.6□□□□□ -0.39
SCAF1-202ENST00000595242 GSDMCQ9BYG8 508 aa12.6□□□□□ -0.39
SCAF1-202ENST00000595242 SUDS3Q9H7L9 328 aaPredicted RBP12.6□□□□□ -0.39
SCAF1-202ENST00000595242 MRM3Q9HC36 420 aaKnown RBP12.6□□□□□ -0.39
SCAF1-202ENST00000595242 SAMD15Q9P1V8 674 aa12.6□□□□□ -0.39
SCAF1-202ENST00000595242 MAP10Q9P2G4 905 aa12.6□□□□□ -0.39
SCAF1-202ENST00000595242 PCNX1Q96RV3 2341 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 ZCWPW2A0A1B0GU75 182 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 HMX2A2RU54 273 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 POLR1CO15160 346 aaPredicted RBP12.59□□□□□ -0.39
SCAF1-202ENST00000595242 HNRNPRO43390 633 aaKnown RBP12.59□□□□□ -0.39
SCAF1-202ENST00000595242 SNX3O60493 162 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 KATNA1O75449 491 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 PIAS1O75925 651 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 VIMP08670 466 aaKnown RBP12.59□□□□□ -0.39
SCAF1-202ENST00000595242 HOXC4P09017 264 aaPredicted RBP12.59□□□□□ -0.39
SCAF1-202ENST00000595242 AK4P27144 223 aaPredicted RBP12.59□□□□□ -0.39
SCAF1-202ENST00000595242 FOXN2P32314 431 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 ETFBP38117 255 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 PPM1FP49593 454 aaPredicted RBP12.59□□□□□ -0.39
SCAF1-202ENST00000595242 PGDP52209 483 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 GPLD1P80108 840 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 ILF3Q12906 894 aaKnown RBP eCLIP12.59□□□□□ -0.39
SCAF1-202ENST00000595242 MPP3Q13368 585 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 UGP2Q16851 508 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 SLC30A9Q6PML9 568 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 KDELC1Q6UW63 502 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 PACS1Q6VY07 963 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 ARHGAP22Q7Z5H3 698 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 NAGSQ8N159 534 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.59□□□□□ -0.39
SCAF1-202ENST00000595242 CCDC197Q8NCU1 140 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 GDAP1Q8TB36 358 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 TCP10LQ8TDR4 215 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 TADA1Q96BN2 335 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 AHCYL2Q96HN2 611 aaKnown RBP12.59□□□□□ -0.39
SCAF1-202ENST00000595242 TBL1YQ9BQ87 522 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 TRIM55Q9BYV6 548 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 TWSG1Q9GZX9 223 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 SLC25A51Q9H1U9 297 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 VPS11Q9H270 941 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 CARS2Q9HA77 564 aaKnown RBP12.59□□□□□ -0.39
SCAF1-202ENST00000595242 ARNT2Q9HBZ2 717 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 PCDH12Q9NPG4 1184 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 CROTQ9UKG9 612 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 GRID1Q9ULK0 1009 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 SLC5A6Q9Y289 635 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 ZGRF1Q86YA3 2104 aa12.59□□□□□ -0.39
SCAF1-202ENST00000595242 MTORP42345 2549 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 POLEQ07864 2286 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 ARHGAP10A1A4S6 786 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 UGT1A9O60656 530 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 TRIM23P36406 574 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 GP5P40197 560 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 MAGEA12P43365 314 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 RENBPP51606 427 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 CRADDP78560 199 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 OLIG2Q13516 323 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 SLC14A2Q15849 920 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 DBN1Q16643 649 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 ANKRD20A4Q4UJ75 823 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 PCID2Q5JVF3 399 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 HHATQ5VTY9 493 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 ALG1LQ6GMV1 187 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 DENND5AQ6IQ26 1287 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 ERAP2Q6P179 960 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 CASC4Q6P4E1 433 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 DNAAF3Q8N9W5 541 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 ZNF669Q96BR6 464 aaPredicted RBP12.58□□□□□ -0.4
SCAF1-202ENST00000595242 IMP4Q96G21 291 aaKnown RBP12.58□□□□□ -0.4
SCAF1-202ENST00000595242 ZNF599Q96NL3 588 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms