RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 GPR1P46091 355 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 ASMTP46597 345 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 STT3AP46977 705 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 ELP6Q0PNE2 266 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 USP39Q53GS9 565 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 PDE12Q6L8Q7 609 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 SLC29A1Q99808 456 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 KLHL28Q9NXS3 571 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 ZNF510Q9Y2H8 683 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 MAP4K5Q9Y4K4 846 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 ERN1O75460 977 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 PRSS56P0CW18 603 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 SKIV2LQ15477 1246 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 NPAS4Q8IUM7 802 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 CMTR2Q8IYT2 770 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 DNAJB8Q8NHS0 232 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 TSPEARQ8WU66 669 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 AIG1Q9NVV5 245 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 PSME2Q9UL46 239 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 RNF11Q9Y3C5 154 aa16.8■□□□□ 0.28
SMARCA4-215ENST00000590574 A0A1B0GVG6 124 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 GRM6O15303 877 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 AIREO43918 545 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 PGRP06401 933 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 C8GP07360 202 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 MAGEA10P43363 369 aaPredicted RBP16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 CARTPTQ16568 116 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 STON2Q8WXE9 905 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 PTERQ96BW5 349 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 RIMS3Q9UJD0 308 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 CDV3Q9UKY7 258 aaKnown RBP16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 NPTX1Q15818 432 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 LRRTM3Q86VH5 581 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 FIBCD1Q8N539 461 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 ZMIZ2Q8NF64 920 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 TMIGD2Q96BF3 282 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 MTERF1Q99551 399 aaKnown RBP16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 TMEM39AQ9NV64 488 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 EEDO75530 441 aaKnown RBP16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 KCNA5P22460 613 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 GCNT6Q5T4J0 391 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 ATG14Q6ZNE5 492 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 CLEC14AQ86T13 490 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 LRCH3Q96II8 777 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 MANBAO00462 879 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 ELFN1P0C7U0 828 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 HNF4AP41235 474 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 UGT2B15P54855 530 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 CHRNA6Q15825 494 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 DENND5AQ6IQ26 1287 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 GPR153Q6NV75 609 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 CCDC149Q6ZUS6 474 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 C11orf65Q8NCR3 313 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 KCNJ9Q92806 393 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 PPP1R14BQ96C90 147 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 ZNF382Q96SR6 550 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 TOR4AQ9NXH8 423 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 USP3Q9Y6I4 520 aa16.79■□□□□ 0.28
SMARCA4-215ENST00000590574 SNPHO15079 494 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 CAPN3P20807 821 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 CDH12P55289 794 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 GALNT1Q10472 559 aaPredicted RBP16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 OR4F3Q6IEY1 312 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 CAPN13Q6MZZ7 669 aaPredicted RBP16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 RNF19BQ6ZMZ0 732 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 DBF4BQ8NFT6 615 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 PIH1D2Q8WWB5 315 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 AURKBQ96GD4 344 aaPredicted RBP16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 QRFPRQ96P65 431 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 SYT17Q9BSW7 474 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 ACAT2Q9BWD1 397 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 HDHD2Q9H0R4 259 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 ADAM30Q9UKF2 790 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 RBM47A0AV96 593 aaKnown RBP16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 AGRPO00253 132 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 FOXD2O60548 495 aaPredicted RBP16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 ABCB7O75027 752 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 CREG1O75629 220 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 RPN2P04844 631 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 ZNF182P17025 639 aaPredicted RBP16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 PRKCZQ05513 592 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 SRSF11Q05519 484 aaKnown RBP16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 AKAP14Q86UN6 197 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 EPHX4Q8IUS5 362 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 ZNF614Q8N883 585 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 KAT8Q9H7Z6 458 aaKnown RBP16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 TMEM165Q9HC07 324 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 A0A1W2PQ67 120 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 GLUD1P00367 558 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 C8BP07358 591 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 IMPDH2P12268 514 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 ALKAL1Q6UXT8 129 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 PAQR9Q6ZVX9 377 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 ZNF557Q8N988 423 aaPredicted RBP16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 WDR36Q8NI36 951 aaKnown RBP16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 RAPGEFL1Q9UHV5 662 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 LOXHD1Q8IVV2 1947 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 MTMR11A4FU01 709 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 PSMD11O00231 422 aa16.78■□□□□ 0.28
SMARCA4-215ENST00000590574 CLDN7O95471 211 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms