RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 ASB11Q8WXH4 323 aa11.03□□□□□ -0.64
LIG3-204ENST00000585740 ELMO1Q92556 727 aa11.03□□□□□ -0.64
LIG3-204ENST00000585740 FGF13Q92913 245 aa11.03□□□□□ -0.64
LIG3-204ENST00000585740 GLMNQ92990 594 aa11.03□□□□□ -0.64
LIG3-204ENST00000585740 GLYATL1Q969I3 302 aa11.03□□□□□ -0.64
LIG3-204ENST00000585740 ESAMQ96AP7 390 aa11.03□□□□□ -0.64
LIG3-204ENST00000585740 AP2M1Q96CW1 435 aa11.03□□□□□ -0.64
LIG3-204ENST00000585740 ZNF570Q96NI8 536 aa11.03□□□□□ -0.64
LIG3-204ENST00000585740 ZNF184Q99676 751 aaPredicted RBP11.03□□□□□ -0.64
LIG3-204ENST00000585740 GPATCH1Q9BRR8 931 aaKnown RBP11.03□□□□□ -0.64
LIG3-204ENST00000585740 TRIM15Q9C019 465 aa11.03□□□□□ -0.64
LIG3-204ENST00000585740 ABCG8Q9H221 673 aa11.03□□□□□ -0.64
LIG3-204ENST00000585740 EBF3Q9H4W6 596 aa11.03□□□□□ -0.64
LIG3-204ENST00000585740 ZFP14Q9HCL3 533 aa11.03□□□□□ -0.64
LIG3-204ENST00000585740 DYRK4Q9NR20 520 aa11.03□□□□□ -0.64
LIG3-204ENST00000585740 ARL15Q9NXU5 204 aa11.03□□□□□ -0.64
LIG3-204ENST00000585740 ASIC5Q9NY37 505 aa11.03□□□□□ -0.64
LIG3-204ENST00000585740 CD300AQ9UGN4 299 aa11.03□□□□□ -0.64
LIG3-204ENST00000585740 PDE10AQ9Y233 779 aa11.03□□□□□ -0.64
LIG3-204ENST00000585740 EIF3LQ9Y262 564 aaKnown RBP11.03□□□□□ -0.64
LIG3-204ENST00000585740 LRCH1Q9Y2L9 728 aa11.03□□□□□ -0.64
LIG3-204ENST00000585740 PTGDR2Q9Y5Y4 395 aa11.03□□□□□ -0.64
LIG3-204ENST00000585740 PIEZO1Q92508 2521 aa11.03□□□□□ -0.64
LIG3-204ENST00000585740 FAM86C2PA6NEL3 165 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 CCDC154A6NI56 674 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 CASQ2O14958 399 aaPredicted RBP11.02□□□□□ -0.65
LIG3-204ENST00000585740 PEX1O43933 1283 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 ULK1O75385 1050 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 EEDO75530 441 aaKnown RBP11.02□□□□□ -0.65
LIG3-204ENST00000585740 SORBS2O94875 1100 aaKnown RBP11.02□□□□□ -0.65
LIG3-204ENST00000585740 SLCO2B1O94956 709 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 CLDN9O95484 217 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 RPSAP08865 295 aaKnown RBP11.02□□□□□ -0.65
LIG3-204ENST00000585740 SLC6A11P48066 632 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 PRLHRP49683 370 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 POLR2JP52435 117 aaKnown RBP11.02□□□□□ -0.65
LIG3-204ENST00000585740 ZNF33BQ06732 778 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 BNIP2Q12982 314 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 PRKG2Q13237 762 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 BOP1Q14137 746 aaKnown RBP11.02□□□□□ -0.65
LIG3-204ENST00000585740 RCAN2Q14206 197 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 IMPG1Q17R60 797 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 GAB4Q2WGN9 574 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 C18orf21Q32NC0 220 aaPredicted RBP11.02□□□□□ -0.65
LIG3-204ENST00000585740 TMEM52BQ4KMG9 183 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 SYTL3Q4VX76 610 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 C9orf64Q5T6V5 341 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 PPP2R2DQ66LE6 453 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 FBXL19Q6PCT2 694 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 TMEM184AQ6ZMB5 413 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 Q6ZSR9 355 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 GET4Q7L5D6 327 aaPredicted RBP11.02□□□□□ -0.65
LIG3-204ENST00000585740 DET1Q7L5Y6 550 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 TRIM46Q7Z4K8 759 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 RASGRP3Q8IV61 690 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 YAF2Q8IY57 180 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 SFRP1Q8N474 314 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 TERB1Q8NA31 727 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 BHLHE22Q8NFJ8 381 aaPredicted RBP11.02□□□□□ -0.65
LIG3-204ENST00000585740 OR2T11Q8NH01 316 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 PIP4K2CQ8TBX8 421 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 SKA2Q8WVK7 121 aaPredicted RBP11.02□□□□□ -0.65
LIG3-204ENST00000585740 SUSD6Q92537 303 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 SCAMP4Q969E2 229 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 RAB7BQ96AH8 199 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 FBXL8Q96CD0 374 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 DTD2Q96FN9 168 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 COQ10AQ96MF6 247 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 FOPNLQ96NB1 174 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 ACOX2Q99424 681 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 ZBTB18Q99592 522 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 CCM2Q9BSQ5 444 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 KLHL4Q9C0H6 718 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 DNAJC11Q9NVH1 559 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 ABCD2Q9UBJ2 740 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 GIMAP2Q9UG22 337 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 CDH7Q9ULB5 785 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 SNX6Q9UNH7 406 aa11.02□□□□□ -0.65
LIG3-204ENST00000585740 ZFC3H1O60293 1989 aaKnown RBP11.02□□□□□ -0.65
LIG3-204ENST00000585740 PRRC2BQ5JSZ5 2229 aaKnown RBP11.02□□□□□ -0.65
LIG3-204ENST00000585740 SERTM1A2A2V5 107 aa11.01□□□□□ -0.65
LIG3-204ENST00000585740 FADS2P1A8MWK0 482 aa11.01□□□□□ -0.65
LIG3-204ENST00000585740 PRRT4C9JH25 899 aa11.01□□□□□ -0.65
LIG3-204ENST00000585740 MANBAO00462 879 aa11.01□□□□□ -0.65
LIG3-204ENST00000585740 ACOT8O14734 319 aa11.01□□□□□ -0.65
LIG3-204ENST00000585740 LIN7AO14910 233 aaPredicted RBP11.01□□□□□ -0.65
LIG3-204ENST00000585740 LSM1O15116 133 aaKnown RBP11.01□□□□□ -0.65
LIG3-204ENST00000585740 SGTAO43765 313 aa11.01□□□□□ -0.65
LIG3-204ENST00000585740 UGDHO60701 494 aa11.01□□□□□ -0.65
LIG3-204ENST00000585740 CATP04040 527 aaKnown RBP11.01□□□□□ -0.65
LIG3-204ENST00000585740 C8BP07358 591 aa11.01□□□□□ -0.65
LIG3-204ENST00000585740 HSD17B1P14061 328 aa11.01□□□□□ -0.65
LIG3-204ENST00000585740 CAPN3P20807 821 aa11.01□□□□□ -0.65
LIG3-204ENST00000585740 MAP4P27816 1152 aaKnown RBP11.01□□□□□ -0.65
LIG3-204ENST00000585740 SLC6A12P48065 614 aa11.01□□□□□ -0.65
LIG3-204ENST00000585740 HTR6P50406 440 aa11.01□□□□□ -0.65
LIG3-204ENST00000585740 DIO3P55073 304 aa11.01□□□□□ -0.65
LIG3-204ENST00000585740 NME5P56597 212 aa11.01□□□□□ -0.65
LIG3-204ENST00000585740 PLOD1Q02809 727 aaPredicted RBP11.01□□□□□ -0.65
LIG3-204ENST00000585740 CREB5Q02930 508 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms