RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 CASP10Q92851 521 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 FAM162AQ96A26 154 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 BSCL2Q96G97 398 aaPredicted RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 NTPCRQ9BSD7 190 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 DESI2Q9BSY9 194 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 UBXN6Q9BZV1 441 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 AMBRA1Q9C0C7 1298 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 NAT10Q9H0A0 1025 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 OPA3Q9H6K4 179 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 KCNMB3Q9NPA1 279 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 IL17RBQ9NRM6 502 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 OLFML3Q9NRN5 406 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 PLSCR4Q9NRQ2 329 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ABHD10Q9NUJ1 306 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 SUCLA2Q9P2R7 463 aaPredicted RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ST3GAL5Q9UNP4 418 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ERVK-11Q9UQG0 969 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 RAI2Q9Y5P3 530 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 MYO16Q9Y6X6 1858 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 IGKV6-21A0A0C4DH24 114 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 A0A0U1RQK1 487 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 EDDM13A0A1B0GTR0 161 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF320A2RRD8 509 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 DENND3A2RUS2 1198 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 MARCH11A6NNE9 402 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ENO4A6NNW6 628 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 H0Y626 953 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 H0YAE9 185 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ACOT8O14734 319 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 CALUO43852 315 aaPredicted RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 SUN1O94901 812 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 PGM3O95394 542 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 MLYCDO95822 493 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 HIST1H2ABP04908 130 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 TPOP07202 933 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 IL9P15248 144 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 TYMPP19971 482 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 HIST1H2ADP20671 130 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 HPDP32754 393 aaPredicted RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 NUDT1P36639 197 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF132P52740 706 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 SLC37A1P57057 533 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 FAM189BP81408 668 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 GRSF1Q12849 480 aaKnown RBP eCLIP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 BAATQ14032 418 aaPredicted RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 SCARB2Q14108 478 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 DRAP1Q14919 205 aaPredicted RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 SLMAPQ14BN4 828 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 MFSD13AQ14CX5 517 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ACOX1Q15067 660 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 TCTN1Q2MV58 587 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 CST9LP1Q5W188 147 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 TPGS2Q68CL5 300 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 NOTUMQ6P988 496 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 IYDQ6PHW0 289 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 CNSTQ6PJW8 725 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 TMEM184AQ6ZMB5 413 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 HIST3H2AQ7L7L0 130 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 BHLHA9Q7RTU4 235 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ARHGAP12Q8IWW6 846 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 UBALD2Q8IYN6 164 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 FAM185AQ8N0U4 392 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 NANOGP1Q8N7R0 232 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 PNLDC1Q8NA58 520 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 CCDC110Q8TBZ0 833 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 HIC2Q96JB3 615 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 GPR78Q96P69 363 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 PAFAH2Q99487 392 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 RAD9AQ99638 391 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 HERC2P3Q9BVR0 1158 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 NUP85Q9BW27 656 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ELOVL1Q9BW60 279 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 CCDC94Q9BW85 323 aaPredicted RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 SLC5A7Q9GZV3 580 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 NUAK2Q9H093 628 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 TRPV6Q9H1D0 765 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 DPH5Q9H2P9 285 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 TLR8Q9NR97 1041 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 TXLNGQ9NUQ3 528 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 DDX19AQ9NUU7 478 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 CHMP5Q9NZZ3 219 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 KIAA1456Q9P272 454 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 UXTQ9UBK9 157 aaPredicted RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 TRPC4Q9UBN4 977 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 MYO6Q9UM54 1294 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF510Q9Y2H8 683 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 BAZ2AQ9UIF9 1905 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 NEDD4P46934 1319 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ARHGEF35A5YM69 484 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 OR6C75A6NL08 312 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 TARM1B6A8C7 271 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF197O14709 1029 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 OGG1O15527 345 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 MOSPD3O75425 235 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 GJB3O75712 270 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 SEC31AO94979 1220 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ZWINTO95229 277 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 LATS1O95835 1130 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 PENKP01210 267 aaPredicted RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ENO1P06733 434 aaKnown RBP1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms