RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	NUDT9	Q9BW91	350 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	NLN	Q9BYT8	704 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	LACRT	Q9GZZ8	138 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	VPS37B	Q9H9H4	285 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	SMARCAL1	Q9NZC9	954 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	SERTAD3	Q9UJW9	196 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	PLAGL1	Q9UM63	463 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	ICK	Q9UPZ9	632 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	EFR3B	Q9Y2G0	817 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	REXO2	Q9Y3B8	237 aa	Known RBP	11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	EPN1	Q9Y6I3	576 aa	Predicted RBP	11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	PRSS21	Q9Y6M0	314 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	PCSK5	Q92824	1860 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	LRRK2	Q5S007	2527 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	IGLV3-16	A0A075B6K0	115 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	TRBV5-4	A0A0C4DH59	114 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	GRID2IP	A4D2P6	1211 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114		E7EQ34	232 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	MATN2	O00339	956 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	MAP3K7	O43318	606 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	HCRTR1	O43613	425 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	CAPN1	P07384	714 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	CTSB	P07858	339 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	RAB40AL	P0C0E4	278 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	OTX2	P32243	289 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	CETN2	P41208	172 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	VAV2	P52735	878 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	CSE1L	P55060	971 aa	Known RBP	11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	GDF10	P55107	478 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	FOXL2	P58012	376 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	SLC9A5	Q14940	896 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	KYNU	Q16719	465 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	GPR33	Q49SQ1	333 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	CCDC38	Q502W7	563 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	KCTD11	Q693B1	232 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	SPESP1	Q6UW49	350 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	RAD9B	Q6WBX8	426 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	HOOK3	Q86VS8	718 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	ZBTB2	Q8N680	514 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	LRRC45	Q96CN5	670 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	CDKN2AIPNL	Q96HQ2	116 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	PSMG3-AS1	Q96PY0	264 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	TMEM121	Q9BTD3	319 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	PITPNM3	Q9BZ71	974 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	TFB2M	Q9H5Q4	396 aa	Known RBP	11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	MVB12B	Q9H7P6	319 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	ARNT2	Q9HBZ2	717 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	LRRC4C	Q9HCJ2	640 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	FAM60A	Q9NP50	221 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	NLE1	Q9NVX2	485 aa	Predicted RBP	11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	SPHK1	Q9NYA1	384 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	ASF1A	Q9Y294	204 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	R3HDM2	Q9Y2K5	976 aa	Known RBP	11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	TDRKH	Q9Y2W6	561 aa	Known RBP	11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	ZNF451	Q9Y4E5	1061 aa		11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	PCDHGA9	Q9Y5G4	932 aa	Known RBP	11.26	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	PIKFYVE	Q9Y2I7	2098 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114		A0A0U1RQJ8	604 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	TCRBV7S2A1N4T	A0A589	114 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114		C9J4A7	227 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	MASP2	O00187	686 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	AGFG2	O95081	481 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	IPO7	O95373	1038 aa	Known RBP	11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	FTCD	O95954	541 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	CBSL	P0DN79	551 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	UGT2B7	P16662	529 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	CBS	P35520	551 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	CD151	P48509	253 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	CACNG1	Q06432	222 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	BOP1	Q14137	746 aa	Known RBP	11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	NCF4	Q15080	339 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	ZIC1	Q15915	447 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	PARP6	Q2NL67	630 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	MLIP	Q5VWP3	458 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	UNC5A	Q6ZN44	842 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	FAM20C	Q8IXL6	584 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	GPR135	Q8IZ08	494 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	C19orf47	Q8N9M1	422 aa	Known RBP	11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	LRRC57	Q8N9N7	239 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	STYX	Q8WUJ0	223 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	ELMO1	Q92556	727 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	PPP1R2P1	Q96PQ5	205 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	ALS2CR12	Q96Q35	445 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	OR2A14	Q96R47	310 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	PANX2	Q96RD6	677 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	SPRTN	Q9H040	489 aa	Predicted RBP	11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	LRRC40	Q9H9A6	602 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	MLXIPL	Q9NP71	852 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	IRAK4	Q9NWZ3	460 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	IMPACT	Q9P2X3	320 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	CIDEB	Q9UHD4	219 aa		11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	FEZ2	Q9UHY8	353 aa	Predicted RBP	11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	UTP20	O75691	2785 aa	Known RBP	11.25	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	NBPF19	A0A087WUL8	3843 aa		11.24	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	CCDC162P	A2VCL2	907 aa		11.24	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	GOLGA6L9	A6NEM1	432 aa		11.24	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114		H7C0S8	307 aa		11.24	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	OR1I1	O60431	355 aa		11.24	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	OR2B3	O76000	313 aa		11.24	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	SORBS2	O94875	1100 aa	Known RBP	11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms