RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 TAS2R42Q7RTR8 314 aa17.34■□□□□ 0.37
MKS1-209ENST00000580127 VSTM4Q8IW00 320 aa17.34■□□□□ 0.37
MKS1-209ENST00000580127 ZADH2Q8N4Q0 377 aa17.34■□□□□ 0.37
MKS1-209ENST00000580127 PHC3Q8NDX5 983 aa17.34■□□□□ 0.37
MKS1-209ENST00000580127 DENND1AQ8TEH3 1009 aa17.34■□□□□ 0.37
MKS1-209ENST00000580127 CALR3Q96L12 384 aaKnown RBP17.34■□□□□ 0.37
MKS1-209ENST00000580127 AP1M1Q9BXS5 423 aa17.34■□□□□ 0.37
MKS1-209ENST00000580127 COG4Q9H9E3 785 aa17.34■□□□□ 0.37
MKS1-209ENST00000580127 POLG2Q9UHN1 485 aa17.34■□□□□ 0.37
MKS1-209ENST00000580127 B3GNT3Q9Y2A9 372 aa17.34■□□□□ 0.37
MKS1-209ENST00000580127 EFR3BQ9Y2G0 817 aa17.34■□□□□ 0.37
MKS1-209ENST00000580127 ENO4A6NNW6 628 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 QSOX1O00391 747 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 BTN3A3O00478 584 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 DDX3YO15523 660 aaKnown RBP17.33■□□□□ 0.36
MKS1-209ENST00000580127 LDB2O43679 373 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 MFAP3LO75121 409 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 CAPN1P07384 714 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 SHMT2P34897 504 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 ADRA1AP35348 466 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 FOLR3P41439 243 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 LMAN1P49257 510 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 DCDP81605 110 aaKnown RBP17.33■□□□□ 0.36
MKS1-209ENST00000580127 SPA17Q15506 151 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 ZRANB3Q5FWF4 1079 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 ANKRD20A2Q5SQ80 823 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 ANKRD20A1Q5TYW2 823 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 ANKRD20A3Q5VUR7 823 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 DARS2Q6PI48 645 aaKnown RBP17.33■□□□□ 0.36
MKS1-209ENST00000580127 FAM198BQ6UWH4 519 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 TMTC1Q8IUR5 882 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 RBMXL3Q8N7X1 1067 aaKnown RBP17.33■□□□□ 0.36
MKS1-209ENST00000580127 OR52E1Q8NGJ3 308 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 PROKR1Q8TCW9 393 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 PTERQ96BW5 349 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 APOL2Q9BQE5 337 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 ILKAPQ9H0C8 392 aaPredicted RBP17.33■□□□□ 0.36
MKS1-209ENST00000580127 OR52A5Q9H2C5 316 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 FAM96AQ9H5X1 160 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 TXLNGQ9NUQ3 528 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 ACTR10Q9NZ32 417 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 LUZP4Q9P127 313 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 NDOR1Q9UHB4 597 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 SRPK3Q9UPE1 567 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 CACNA1DQ01668 2161 aa17.33■□□□□ 0.36
MKS1-209ENST00000580127 MACROD2A1Z1Q3 448 aa17.32■□□□□ 0.36
MKS1-209ENST00000580127 AKR1B15C9JRZ8 316 aaPredicted RBP17.32■□□□□ 0.36
MKS1-209ENST00000580127 SGTAO43765 313 aa17.32■□□□□ 0.36
MKS1-209ENST00000580127 AP2A2O94973 939 aa17.32■□□□□ 0.36
MKS1-209ENST00000580127 TMPRSS15P98073 1019 aa17.32■□□□□ 0.36
MKS1-209ENST00000580127 PLOD1Q02809 727 aaPredicted RBP17.32■□□□□ 0.36
MKS1-209ENST00000580127 PRKG2Q13237 762 aa17.32■□□□□ 0.36
MKS1-209ENST00000580127 PLEKHN1Q494U1 663 aaPredicted RBP17.32■□□□□ 0.36
MKS1-209ENST00000580127 ZNF789Q5FWF6 425 aa17.32■□□□□ 0.36
MKS1-209ENST00000580127 TLDC1Q6P9B6 456 aa17.32■□□□□ 0.36
MKS1-209ENST00000580127 SPESP1Q6UW49 350 aa17.32■□□□□ 0.36
MKS1-209ENST00000580127 MAMDC2Q7Z304 686 aaPredicted RBP17.32■□□□□ 0.36
MKS1-209ENST00000580127 GALNT16Q8N428 558 aa17.32■□□□□ 0.36
MKS1-209ENST00000580127 LILRA3Q8N6C8 439 aaPredicted RBP17.32■□□□□ 0.36
MKS1-209ENST00000580127 OR13C4Q8NGS5 318 aa17.32■□□□□ 0.36
MKS1-209ENST00000580127 C5orf34Q96MH7 638 aa17.32■□□□□ 0.36
MKS1-209ENST00000580127 TBL1YQ9BQ87 522 aa17.32■□□□□ 0.36
MKS1-209ENST00000580127 CHRNA10Q9GZZ6 450 aa17.32■□□□□ 0.36
MKS1-209ENST00000580127 ARNT2Q9HBZ2 717 aa17.32■□□□□ 0.36
MKS1-209ENST00000580127 ATP13A2Q9NQ11 1180 aa17.32■□□□□ 0.36
MKS1-209ENST00000580127 IRAK4Q9NWZ3 460 aa17.32■□□□□ 0.36
MKS1-209ENST00000580127 IFT80Q9P2H3 777 aaPredicted RBP17.32■□□□□ 0.36
MKS1-209ENST00000580127 PTRH2Q9Y3E5 179 aaKnown RBP17.32■□□□□ 0.36
MKS1-209ENST00000580127 UNC79Q9P2D8 2635 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 LIN7AO14910 233 aaPredicted RBP17.31■□□□□ 0.36
MKS1-209ENST00000580127 PIM1P11309 404 aaPredicted RBP17.31■□□□□ 0.36
MKS1-209ENST00000580127 MC4RP32245 332 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 EIF3EP60228 445 aaKnown RBP17.31■□□□□ 0.36
MKS1-209ENST00000580127 MRPL49Q13405 166 aaKnown RBP17.31■□□□□ 0.36
MKS1-209ENST00000580127 RAPSNQ13702 412 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 BOP1Q14137 746 aaKnown RBP17.31■□□□□ 0.36
MKS1-209ENST00000580127 MYBPC3Q14896 1274 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 DCAF10Q5QP82 559 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 IRAK1BP1Q5VVH5 260 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 HIST2H2BCQ6DN03 193 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 RHBDD2Q6NTF9 364 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 C11orf63Q6NUN7 778 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 IGFL3Q6UXB1 125 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 CDHR3Q6ZTQ4 885 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 SERPINA9Q86WD7 417 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 ADGRF3Q8IZF5 1079 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 CISD2Q8N5K1 135 aaKnown RBP17.31■□□□□ 0.36
MKS1-209ENST00000580127 C19orf47Q8N9M1 422 aaKnown RBP17.31■□□□□ 0.36
MKS1-209ENST00000580127 Q8NA96 180 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 NAT14Q8WUY8 206 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 NACC2Q96BF6 587 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 SNRNP40Q96DI7 357 aaKnown RBP17.31■□□□□ 0.36
MKS1-209ENST00000580127 VPS50Q96JG6 964 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 TTC1Q99614 292 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 NDC1Q9BTX1 674 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 HGH1Q9BTY7 390 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 KLHL25Q9H0H3 589 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 AGPAT4Q9NRZ5 378 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 OR6C2Q9NZP2 312 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 SLC5A6Q9Y289 635 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms