RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 ARPC2O15144 300 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 CLOCKO15516 846 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 GPR39O43194 453 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 BRINP1O60477 761 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 SNAP91O60641 907 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 SNX2O60749 519 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 RAMP2O60895 175 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 PFDN1O60925 122 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 KERAO60938 352 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 CLASP2O75122 1294 aaKnown RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 ZNF623O75123 536 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 VPS26AO75436 327 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 NDUFS3O75489 264 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 GMNNO75496 209 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 ATP6AP2O75787 350 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 WISP3O95389 354 aaPredicted RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 NDST3O95803 873 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 SERPINF2P08697 491 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 ALDOCP09972 364 aaKnown RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 SPATA31D3P0C874 917 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 HGFP14210 728 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 ZNF37AP17032 561 aaPredicted RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 CDH2P19022 906 aaPredicted RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 EEF1DP29692 281 aaKnown RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 PBX3P40426 434 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 MAPKAPK2P49137 400 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 SUOXP51687 545 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 ADARP55265 1226 aaKnown RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 CDH13P55290 713 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 EEFSECP57772 596 aaKnown RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 YBEYP58557 167 aaPredicted RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 ACVR1Q04771 509 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 CACNB2Q08289 660 aaPredicted RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 SLC10A7Q0GE19 358 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 GRIK2Q13002 908 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 LPIN1Q14693 890 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 POLD3Q15054 466 aaPredicted RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 ATP6AP1Q15904 470 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 PFKFB4Q16877 469 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 SLC39A12Q504Y0 691 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 MS4A13Q5J8X5 152 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 FAM209AQ5JX71 171 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 RAP1GAP2Q684P5 730 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 AFTPHQ6ULP2 937 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 SPATA31D4Q6ZUB0 917 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 NLRC3Q7RTR2 1065 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 SCD5Q86SK9 330 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 ISCA2Q86U28 154 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 LDB1Q86U70 411 aaPredicted RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 PIM3Q86V86 326 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 SPPL2CQ8IUH8 684 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 CLVS1Q8IUQ0 354 aaPredicted RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 CROCCP3Q8IVE0 287 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 SLC15A3Q8IY34 581 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 TBC1D21Q8IYX1 336 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 FIBCD1Q8N539 461 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 NKAPQ8N5F7 415 aaKnown RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 DHRSXQ8N5I4 330 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 TEX26Q8N6G2 289 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 C2orf69Q8N8R5 385 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 SNX31Q8N9S9 440 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 FAM47BQ8NA70 645 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 OR56A4Q8NGH8 313 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 OR52K2Q8NGK3 314 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 OR4L1Q8NH43 312 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 DNAJB8Q8NHS0 232 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 STAG3L4Q8TBR4 150 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 BRSK1Q8TDC3 778 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 DIS3LQ8TF46 1054 aaKnown RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 OSCP1Q8WVF1 389 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 ANKRD49Q8WVL7 239 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 CYGBQ8WWM9 190 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 SOCS4Q8WXH5 440 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 KLHL6Q8WZ60 621 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 SEPT8Q92599 483 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 PTERQ96BW5 349 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 CENPNQ96H22 339 aaPredicted RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 FUBP3Q96I24 572 aaKnown RBP eCLIP5.61□□□□□ -1.51
CTNS-210ENST00000576979 DNAJC1Q96KC8 554 aaKnown RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 BTN2A3PQ96KV6 586 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 TBATAQ96M53 351 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 BIRC8Q96P09 236 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 RPRD1AQ96P16 312 aaPredicted RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 KLHL5Q96PQ7 755 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 SLC29A1Q99808 456 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 SEMA3CQ99985 751 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 KCTD14Q9BQ13 255 aaPredicted RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 PAAF1Q9BRP4 392 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 GPATCH1Q9BRR8 931 aaKnown RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 YIPF4Q9BSR8 244 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 ADI1Q9BV57 179 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 YTHDF1Q9BYJ9 559 aaKnown RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 GPR62Q9BZJ7 368 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 ZNF106Q9H2Y7 1883 aaKnown RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 NOL6Q9H6R4 1146 aaKnown RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 AGO3Q9H9G7 860 aaKnown RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 NMUR1Q9HB89 426 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 PLGRKTQ9HBL7 147 aa5.61□□□□□ -1.51
CTNS-210ENST00000576979 FBRSL1Q9HCM7 1045 aaKnown RBP5.61□□□□□ -1.51
CTNS-210ENST00000576979 TNFRSF12AQ9NP84 129 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms