RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 MAP4P27816 1152 aaKnown RBP22.88■■□□□ 1.25
RAB40C-212ENST00000569575 HSD17B2P37059 387 aa22.88■■□□□ 1.25
RAB40C-212ENST00000569575 UBE2IP63279 158 aaKnown RBP22.88■■□□□ 1.25
RAB40C-212ENST00000569575 KRT33BQ14525 404 aa22.88■■□□□ 1.25
RAB40C-212ENST00000569575 SEPT7Q16181 437 aaKnown RBP22.88■■□□□ 1.25
RAB40C-212ENST00000569575 RAB42Q8N4Z0 105 aa22.88■■□□□ 1.25
RAB40C-212ENST00000569575 GOLGA6L1Q8N7Z2 621 aa22.88■■□□□ 1.25
RAB40C-212ENST00000569575 STAG3L4Q8TBR4 150 aa22.88■■□□□ 1.25
RAB40C-212ENST00000569575 KIAA1191Q96A73 305 aa22.88■■□□□ 1.25
RAB40C-212ENST00000569575 RAB11FIP5Q9BXF6 653 aa22.88■■□□□ 1.25
RAB40C-212ENST00000569575 VPS11Q9H270 941 aa22.88■■□□□ 1.25
RAB40C-212ENST00000569575 EPB41L1Q9H4G0 881 aa22.88■■□□□ 1.25
RAB40C-212ENST00000569575 RDH14Q9HBH5 336 aa22.88■■□□□ 1.25
RAB40C-212ENST00000569575 PARVBQ9HBI1 364 aa22.88■■□□□ 1.25
RAB40C-212ENST00000569575 SSU72Q9NP77 194 aaKnown RBP22.88■■□□□ 1.25
RAB40C-212ENST00000569575 MKS1Q9NXB0 559 aa22.88■■□□□ 1.25
RAB40C-212ENST00000569575 ZNF624Q9P2J8 865 aaPredicted RBP22.88■■□□□ 1.25
RAB40C-212ENST00000569575 EP300Q09472 2414 aaPredicted RBP22.87■■□□□ 1.25
RAB40C-212ENST00000569575 B4DGG1 531 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 FFAR2O15552 330 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 RBP1P09455 135 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 HIST1H2AGP0C0S8 130 aaPredicted RBP22.87■■□□□ 1.25
RAB40C-212ENST00000569575 CD59P13987 128 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 HIST1H2ADP20671 130 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 SLC19A1P41440 591 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 GPR3P46089 330 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 AP1S2P56377 157 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 SLC18A2Q05940 514 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 ABRQ12979 859 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 BIRC2Q13490 618 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 NR0B2Q15466 257 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.87■■□□□ 1.25
RAB40C-212ENST00000569575 NAPRTQ6XQN6 538 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 SH2D5Q6ZV89 423 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 CLEC14AQ86T13 490 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 CYP4X1Q8N118 509 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 ARL14Q8N4G2 192 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 OR2I1PQ8NGU4 316 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 SLC37A2Q8TED4 501 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 ANKRD49Q8WVL7 239 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 HIST1H2AHQ96KK5 128 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 SMC6Q96SB8 1091 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 HIST1H2AJQ99878 128 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 H2AFJQ9BTM1 129 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 KIR3DX1Q9H7L2 352 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 SLC40A1Q9NP59 571 aa22.87■■□□□ 1.25
RAB40C-212ENST00000569575 IMP3Q9NV31 184 aaKnown RBP22.87■■□□□ 1.25
RAB40C-212ENST00000569575 FAM221BA6H8Z2 402 aa22.86■■□□□ 1.25
RAB40C-212ENST00000569575 C4orf47A7E2U8 309 aa22.86■■□□□ 1.25
RAB40C-212ENST00000569575 TRIM38O00635 465 aa22.86■■□□□ 1.25
RAB40C-212ENST00000569575 SIGLEC6O43699 453 aa22.86■■□□□ 1.25
RAB40C-212ENST00000569575 GFRA3O60609 400 aa22.86■■□□□ 1.25
RAB40C-212ENST00000569575 C1orf105O95561 183 aa22.86■■□□□ 1.25
RAB40C-212ENST00000569575 CD1DP15813 335 aa22.86■■□□□ 1.25
RAB40C-212ENST00000569575 KRT4P19013 534 aa22.86■■□□□ 1.25
RAB40C-212ENST00000569575 CDKL1Q00532 357 aa22.86■■□□□ 1.25
RAB40C-212ENST00000569575 HHEXQ03014 270 aa22.86■■□□□ 1.25
RAB40C-212ENST00000569575 CSHL1Q14406 222 aa22.86■■□□□ 1.25
RAB40C-212ENST00000569575 ZNF460Q14592 562 aa22.86■■□□□ 1.25
RAB40C-212ENST00000569575 STPG1Q5TH74 334 aa22.86■■□□□ 1.25
RAB40C-212ENST00000569575 AGBL2Q5U5Z8 902 aa22.86■■□□□ 1.25
RAB40C-212ENST00000569575 EID2Q8N6I1 236 aa22.86■■□□□ 1.25
RAB40C-212ENST00000569575 SPDYE1Q8NFV5 336 aaPredicted RBP22.86■■□□□ 1.25
RAB40C-212ENST00000569575 NETO1Q8TDF5 533 aa22.86■■□□□ 1.25
RAB40C-212ENST00000569575 RHBDD1Q8TEB9 315 aa22.86■■□□□ 1.25
RAB40C-212ENST00000569575 APOLD1Q96LR9 279 aa22.86■■□□□ 1.25
RAB40C-212ENST00000569575 FERD3LQ96RJ6 166 aa22.86■■□□□ 1.25
RAB40C-212ENST00000569575 TMBIM4Q9HC24 238 aa22.86■■□□□ 1.25
RAB40C-212ENST00000569575 SCHIP1Q9P0W5 487 aaPredicted RBP22.86■■□□□ 1.25
RAB40C-212ENST00000569575 GRID1Q9ULK0 1009 aa22.86■■□□□ 1.25
RAB40C-212ENST00000569575 TMCO1Q9UM00 188 aa22.86■■□□□ 1.25
RAB40C-212ENST00000569575 PADI4Q9UM07 663 aa22.86■■□□□ 1.25
RAB40C-212ENST00000569575 ZNF839A8K0R7 811 aa22.85■■□□□ 1.25
RAB40C-212ENST00000569575 SYCE1LA8MT33 242 aa22.85■■□□□ 1.25
RAB40C-212ENST00000569575 GLRA3O75311 464 aa22.85■■□□□ 1.25
RAB40C-212ENST00000569575 EML2O95834 649 aa22.85■■□□□ 1.25
RAB40C-212ENST00000569575 PYGBP11216 843 aa22.85■■□□□ 1.25
RAB40C-212ENST00000569575 CKMT1AP12532 417 aa22.85■■□□□ 1.25
RAB40C-212ENST00000569575 SDHBP21912 280 aa22.85■■□□□ 1.25
RAB40C-212ENST00000569575 CRHR1P34998 444 aa22.85■■□□□ 1.25
RAB40C-212ENST00000569575 EPHA4P54764 986 aa22.85■■□□□ 1.25
RAB40C-212ENST00000569575 NR1D2Q14995 579 aa22.85■■□□□ 1.25
RAB40C-212ENST00000569575 ARHGAP19Q14CB8 494 aa22.85■■□□□ 1.25
RAB40C-212ENST00000569575 PROX2Q3B8N5 592 aa22.85■■□□□ 1.25
RAB40C-212ENST00000569575 PPM1JQ5JR12 505 aa22.85■■□□□ 1.25
RAB40C-212ENST00000569575 UBE2R2Q712K3 238 aaPredicted RBP22.85■■□□□ 1.25
RAB40C-212ENST00000569575 PIWIL4Q7Z3Z4 852 aaKnown RBP22.85■■□□□ 1.25
RAB40C-212ENST00000569575 ZNF438Q7Z4V0 828 aa22.85■■□□□ 1.25
RAB40C-212ENST00000569575 SLC35F3Q8IY50 421 aa22.85■■□□□ 1.25
RAB40C-212ENST00000569575 CENPLQ8N0S6 344 aaPredicted RBP22.85■■□□□ 1.25
RAB40C-212ENST00000569575 PHOX2BQ99453 314 aa22.85■■□□□ 1.25
RAB40C-212ENST00000569575 IGSF5Q9NSI5 407 aa22.85■■□□□ 1.25
RAB40C-212ENST00000569575 RUVBL2Q9Y230 463 aaKnown RBP22.85■■□□□ 1.25
RAB40C-212ENST00000569575 RIF1Q5UIP0 2472 aaKnown RBP22.85■■□□□ 1.25
RAB40C-212ENST00000569575 FAM186AA6NE01 2351 aa22.84■■□□□ 1.25
RAB40C-212ENST00000569575 A0A1W2PPM1 405 aa22.84■■□□□ 1.25
RAB40C-212ENST00000569575 EME2A4GXA9 379 aaPredicted RBP22.84■■□□□ 1.25
RAB40C-212ENST00000569575 LILRA5A6NI73 299 aa22.84■■□□□ 1.25
RAB40C-212ENST00000569575 OR52A4PA6NMU1 304 aa22.84■■□□□ 1.25
RAB40C-212ENST00000569575 LDOC1O95751 146 aaPredicted RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms