RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 DNAJC3Q13217 504 aa15.66■□□□□ 0.1
USB1-215ENST00000569252 OGFOD3Q6PK18 319 aa15.66■□□□□ 0.1
USB1-215ENST00000569252 PAQR3Q6TCH7 311 aa15.66■□□□□ 0.1
USB1-215ENST00000569252 DBX2Q6ZNG2 339 aa15.66■□□□□ 0.1
USB1-215ENST00000569252 TBC1D1Q86TI0 1168 aaPredicted RBP15.66■□□□□ 0.1
USB1-215ENST00000569252 SLC22A15Q8IZD6 547 aa15.66■□□□□ 0.1
USB1-215ENST00000569252 LKAAEAR1Q8TD35 194 aa15.66■□□□□ 0.1
USB1-215ENST00000569252 TFGQ92734 400 aaPredicted RBP15.66■□□□□ 0.1
USB1-215ENST00000569252 CDC6Q99741 560 aa15.66■□□□□ 0.1
USB1-215ENST00000569252 CAB39LQ9H9S4 337 aa15.66■□□□□ 0.1
USB1-215ENST00000569252 IMP3Q9NV31 184 aaKnown RBP15.66■□□□□ 0.1
USB1-215ENST00000569252 ST14Q9Y5Y6 855 aa15.66■□□□□ 0.1
USB1-215ENST00000569252 HELZ2Q9BYK8 2649 aaKnown RBP15.66■□□□□ 0.1
USB1-215ENST00000569252 A0A087X1B8 175 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 SIGLEC6O43699 453 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 ZBTB14O43829 449 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 MT-ND3P03897 115 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 MPOP05164 745 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 XRCC1P18887 633 aaPredicted RBP15.65■□□□□ 0.1
USB1-215ENST00000569252 MAP4P27816 1152 aaKnown RBP15.65■□□□□ 0.1
USB1-215ENST00000569252 PDHA2P29803 388 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 CYP4F3Q08477 520 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 BMPR2Q13873 1038 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 CLCA4Q14CN2 919 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 RPE65Q16518 533 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 C14orf28Q4W4Y0 310 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 ACSBG2Q5FVE4 666 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 CAPRIN2Q6IMN6 1127 aaKnown RBP15.65■□□□□ 0.1
USB1-215ENST00000569252 NEK10Q6ZWH5 1172 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 HDXQ7Z353 690 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 KANSL1Q7Z3B3 1105 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 PIM3Q86V86 326 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 TDRPQ86YL5 185 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 RBM12BQ8IXT5 1001 aaKnown RBP15.65■□□□□ 0.1
USB1-215ENST00000569252 CPNE9Q8IYJ1 553 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 RIBC1Q8N443 379 aaPredicted RBP15.65■□□□□ 0.1
USB1-215ENST00000569252 RAB42Q8N4Z0 105 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 LILRA3Q8N6C8 439 aaPredicted RBP15.65■□□□□ 0.1
USB1-215ENST00000569252 FAM181AQ8N9Y4 354 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 OR2W6PQ8NHA6 318 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 CD200R1Q8TD46 325 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 EEF1AKMT1Q8WVE0 214 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 CABS1Q96KC9 395 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 CNDP2Q96KP4 475 aaKnown RBP15.65■□□□□ 0.1
USB1-215ENST00000569252 APOLD1Q96LR9 279 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 OLFM1Q99784 485 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 MCMBPQ9BTE3 642 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 DHRS4Q9BTZ2 278 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.65■□□□□ 0.1
USB1-215ENST00000569252 OR52A5Q9H2C5 316 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 TRIT1Q9H3H1 467 aaKnown RBP15.65■□□□□ 0.1
USB1-215ENST00000569252 CAAP1Q9H8G2 361 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 GALPQ9UBC7 116 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 FTSJ1Q9UET6 329 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 POLG2Q9UHN1 485 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 TSR3Q9UJK0 312 aaKnown RBP15.65■□□□□ 0.1
USB1-215ENST00000569252 ASF1AQ9Y294 204 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 ACOT9Q9Y305 439 aa15.65■□□□□ 0.1
USB1-215ENST00000569252 FLNBO75369 2602 aaKnown RBP15.64■□□□□ 0.1
USB1-215ENST00000569252 TRIM49D1C9J1S8 452 aa15.64■□□□□ 0.09
USB1-215ENST00000569252 TRIM38O00635 465 aa15.64■□□□□ 0.09
USB1-215ENST00000569252 MPC1LP0DKB6 136 aa15.64■□□□□ 0.09
USB1-215ENST00000569252 KRT71Q3SY84 523 aa15.64■□□□□ 0.09
USB1-215ENST00000569252 LRIG3Q6UXM1 1119 aa15.64■□□□□ 0.09
USB1-215ENST00000569252 NAGSQ8N159 534 aa15.64■□□□□ 0.09
USB1-215ENST00000569252 ARL14Q8N4G2 192 aa15.64■□□□□ 0.09
USB1-215ENST00000569252 ZFPM2Q8WW38 1151 aa15.64■□□□□ 0.09
USB1-215ENST00000569252 LINGO1Q96FE5 620 aa15.64■□□□□ 0.09
USB1-215ENST00000569252 INSM2Q96T92 566 aaPredicted RBP15.64■□□□□ 0.09
USB1-215ENST00000569252 SLC38A3Q99624 504 aa15.64■□□□□ 0.09
USB1-215ENST00000569252 TRIM54Q9BYV2 358 aa15.64■□□□□ 0.09
USB1-215ENST00000569252 VPS11Q9H270 941 aa15.64■□□□□ 0.09
USB1-215ENST00000569252 CENPHQ9H3R5 247 aa15.64■□□□□ 0.09
USB1-215ENST00000569252 MVB12BQ9H7P6 319 aa15.64■□□□□ 0.09
USB1-215ENST00000569252 POT1Q9NUX5 634 aa15.64■□□□□ 0.09
USB1-215ENST00000569252 CPNE7Q9UBL6 633 aa15.64■□□□□ 0.09
USB1-215ENST00000569252 PADI4Q9UM07 663 aa15.64■□□□□ 0.09
USB1-215ENST00000569252 WDR37Q9Y2I8 494 aa15.64■□□□□ 0.09
USB1-215ENST00000569252 CFAP20Q9Y6A4 193 aaKnown RBP15.64■□□□□ 0.09
USB1-215ENST00000569252 TDRD6O60522 2096 aaKnown RBP15.63■□□□□ 0.09
USB1-215ENST00000569252 A0A096LPK6 155 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 OR52A4PA6NMU1 304 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 CATP04040 527 aaKnown RBP15.63■□□□□ 0.09
USB1-215ENST00000569252 HIST1H2AGP0C0S8 130 aaPredicted RBP15.63■□□□□ 0.09
USB1-215ENST00000569252 MYZAPP0CAP1 466 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 CCDC166P0CW27 439 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 MTHFD1P11586 935 aaKnown RBP15.63■□□□□ 0.09
USB1-215ENST00000569252 GLB1P16278 677 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 HIST1H2ADP20671 130 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 SLC26A3P40879 764 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 CCNFP41002 786 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 HHEXQ03014 270 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 RASA2Q15283 850 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 FAM83EQ2M2I3 478 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 ZNF658BQ4V348 819 aaPredicted RBP15.63■□□□□ 0.09
USB1-215ENST00000569252 CEP85LQ5SZL2 805 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 KLC3Q6P597 504 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 UNC5DQ6UXZ4 953 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 CEP97Q8IW35 865 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 TBC1D21Q8IYX1 336 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms