RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 ILF3Q12906 894 aaKnown RBP eCLIP5.57□□□□□ -1.52
CDH13-211ENST00000568770 RALGDSQ12967 914 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 NADK2Q4G0N4 442 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 INO80DQ53TQ3 878 aaPredicted RBP5.57□□□□□ -1.52
CDH13-211ENST00000568770 C2CD6Q53TS8 623 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 CFAP58Q5T655 872 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 FAM102AQ5T9C2 384 aaPredicted RBP5.57□□□□□ -1.52
CDH13-211ENST00000568770 FAM72AQ5TYM5 149 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 MANEALQ5VSG8 457 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 C1QL3Q5VWW1 255 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 FAM72DQ6L9T8 149 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 PNCKQ6P2M8 343 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 TRIM65Q6PJ69 517 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 WDR74Q6RFH5 385 aaPredicted RBP5.57□□□□□ -1.52
CDH13-211ENST00000568770 ARHGEF18Q6ZSZ5 1173 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 ENOSF1Q7L5Y1 443 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 BNIPLQ7Z465 357 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 PHLDB2Q86SQ0 1253 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 SLC47A2Q86VL8 602 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 FAM72BQ86X60 149 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 DNAAF5Q86Y56 855 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 CAMK1DQ8IU85 385 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 ZDHHC17Q8IUH5 632 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 ANKRD53Q8N9V6 530 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 GLB1L3Q8NCI6 653 aaPredicted RBP5.57□□□□□ -1.52
CDH13-211ENST00000568770 HCAR2Q8TDS4 363 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 CASKIN2Q8WXE0 1202 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 NEIL1Q96FI4 390 aaPredicted RBP5.57□□□□□ -1.52
CDH13-211ENST00000568770 TEKT5Q96M29 485 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 GNRHR2Q96P88 292 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 GSDMAQ96QA5 445 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 MAGEB5Q9BZ81 275 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 SCAND2PQ9GZW5 306 aaPredicted RBP5.57□□□□□ -1.52
CDH13-211ENST00000568770 MEGF9Q9H1U4 602 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 RETREG1Q9H6L5 497 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 WDR26Q9H7D7 661 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 TMEM51Q9NW97 253 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 TMEM248Q9NWD8 314 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 TRNAU1APQ9NX07 287 aaKnown RBP5.57□□□□□ -1.52
CDH13-211ENST00000568770 DONSONQ9NYP3 566 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 PDP2Q9P2J9 529 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 LHX3Q9UBR4 397 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 ERRFI1Q9UJM3 462 aaPredicted RBP5.57□□□□□ -1.52
CDH13-211ENST00000568770 SUFUQ9UMX1 484 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 G3BP2Q9UN86 482 aaKnown RBP5.57□□□□□ -1.52
CDH13-211ENST00000568770 NEU3Q9UQ49 428 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 POLHQ9Y253 713 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 RPS6KL1Q9Y6S9 549 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 MAP1AP78559 2803 aaPredicted RBP5.57□□□□□ -1.52
CDH13-211ENST00000568770 PIKFYVEQ9Y2I7 2098 aa5.57□□□□□ -1.52
CDH13-211ENST00000568770 FER1L5A0AVI2 2057 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 CFAP69A5D8W1 941 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 GOLGA8SH3BPF8 625 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 PSMA7O14818 248 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 POLR1CO15160 346 aaPredicted RBP5.56□□□□□ -1.52
CDH13-211ENST00000568770 DAPK3O43293 454 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 NRP2O60462 931 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 TOX4O94842 621 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 SORBS2O94875 1100 aaKnown RBP5.56□□□□□ -1.52
CDH13-211ENST00000568770 ZRANB2O95218 330 aaKnown RBP eCLIP5.56□□□□□ -1.52
CDH13-211ENST00000568770 LDLRP01130 860 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 ELFN1P0C7U0 828 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 MTHFD2P13995 350 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 CTSSP25774 331 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 ADRA1BP35368 520 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 KIR2DL3P43628 341 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 POLD2P49005 469 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 SESN2P58004 480 aaPredicted RBP5.56□□□□□ -1.52
CDH13-211ENST00000568770 BPIFB4P59827 614 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 STIM1Q13586 685 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 RAPGEF1Q13905 1077 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 GRM3Q14832 879 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 ACOX1Q15067 660 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 CYTH1Q15438 398 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 INPP5JQ15735 1006 aaPredicted RBP5.56□□□□□ -1.52
CDH13-211ENST00000568770 CDO1Q16878 200 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 PRR30Q53SZ7 412 aaPredicted RBP5.56□□□□□ -1.52
CDH13-211ENST00000568770 ZFYVE27Q5T4F4 411 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 ISM2Q6H9L7 571 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 TTI2Q6NXR4 508 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 BRAT1Q6PJG6 821 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 TTLL10Q6ZVT0 673 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 ARHGAP22Q7Z5H3 698 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 XYLT1Q86Y38 959 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 APLFQ8IW19 511 aaPredicted RBP5.56□□□□□ -1.52
CDH13-211ENST00000568770 GPR135Q8IZ08 494 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 ESX1Q8N693 406 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 LILRA3Q8N6C8 439 aaPredicted RBP5.56□□□□□ -1.52
CDH13-211ENST00000568770 EMC1Q8N766 993 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 OR10G6Q8NH81 332 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 SHC3Q92529 594 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 NCSTNQ92542 709 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 GCDHQ92947 438 aaPredicted RBP5.56□□□□□ -1.52
CDH13-211ENST00000568770 C18orf8Q96DM3 657 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 TBC1D31Q96DN5 1066 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 CCDC34Q96HJ3 373 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 DHTKD1Q96HY7 919 aaPredicted RBP5.56□□□□□ -1.52
CDH13-211ENST00000568770 ZNF641Q96N77 438 aaPredicted RBP5.56□□□□□ -1.52
CDH13-211ENST00000568770 LRRC37BQ96QE4 947 aa5.56□□□□□ -1.52
CDH13-211ENST00000568770 CRACR2AQ9BSW2 395 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms