RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 TESMINQ9Y4I5 508 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 LTBP4Q8N2S1 1624 aa3.25□□□□□ -1.89
HERPUD1-211ENST00000566550 A0A087WZY1 265 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 MACROD2A1Z1Q3 448 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 TMEM8BA6NDV4 472 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 DUXAA6NLW8 204 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 MARCH11A6NNE9 402 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 F8WDY8 70 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 H0YIG0 161 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 M0QZ24 198 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 RRHO14718 337 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 ANGPT2O15123 496 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 MAGEB2O15479 319 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 NDUFS4O43181 175 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 KIF1CO43896 1103 aaKnown RBP3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 SSX4O60224 188 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 UGDHO60701 494 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 MOSPD3O75425 235 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 EPN2O95208 641 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 SKILP12757 684 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 FUT1P19526 365 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 BMP5P22003 454 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 UBA1P22314 1058 aaKnown RBP3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 MPZP25189 248 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 PRDX6P30041 224 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 SLC6A6P31641 620 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 MMP13P45452 471 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 GPR12P47775 334 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 SOX2P48431 317 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 MAPK12P53778 367 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 MTCP1P56278 107 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 POLR2LP62875 67 aaKnown RBP3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 CYP4F2P78329 520 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 COG7P83436 770 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 CDK3Q00526 305 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 PLA2G7Q13093 441 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 GPM6BQ13491 265 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 PDE7AQ13946 482 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 MELKQ14680 651 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 LPIN1Q14693 890 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 PRKD1Q15139 912 aaPredicted RBP3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 ZMYND11Q15326 602 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 CARTPTQ16568 116 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 ALG10Q5BKT4 473 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 ALG10BQ5I7T1 473 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 CYP4A22Q5TCH4 519 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 PRAMEF7Q5VXH5 474 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 NSUN5P2Q63ZY6 315 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 ARSKQ6UWY0 536 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 LRIG3Q6UXM1 1119 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 LINGO2Q7L985 606 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 SERPINA11Q86U17 422 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 LUZP1Q86V48 1076 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 SIAH3Q8IW03 269 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 DENND6AQ8IWF6 608 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 C1orf87Q8N0U7 546 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 HORMAD2Q8N7B1 307 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 ZNF611Q8N823 705 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 TERB1Q8NA31 727 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 FAM47BQ8NA70 645 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 AGR3Q8TD06 166 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 ELP5Q8TE02 316 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 FCGR1BQ92637 280 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 MOB3AQ96BX8 217 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 SNRNP40Q96DI7 357 aaKnown RBP3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 SGF29Q96ES7 293 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 CFAP36Q96G28 342 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 PRMT6Q96LA8 375 aaPredicted RBP3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 FAM213AQ9BRX8 229 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 ZPBPQ9BS86 351 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 GCOM2Q9BZD3 368 aaPredicted RBP3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 WNT5BQ9H1J7 359 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 DPAGT1Q9H3H5 408 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 NCOR1P1Q9H4R4 102 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 PPP1R3EQ9H7J1 279 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 MVB12BQ9H7P6 319 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 PNPLA3Q9NST1 481 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 TMEM74BQ9NUR3 256 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 OSER1Q9NX31 292 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 ASIC5Q9NY37 505 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 PPP4R1LQ9P1A2 415 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 BAIAP2L1Q9UHR4 511 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 TLK1Q9UKI8 766 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 TSPAN16Q9UKR8 245 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 DNPEPQ9ULA0 475 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 CDC14AQ9UNH5 594 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 GPR132Q9UNW8 380 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 ZFR2Q9UPR6 939 aaKnown RBP3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 MST1RQ04912 1400 aa3.24□□□□□ -1.89
HERPUD1-211ENST00000566550 SPATA31A1Q5TZJ5 1347 aa3.23□□□□□ -1.89
HERPUD1-211ENST00000566550 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.23□□□□□ -1.89
HERPUD1-211ENST00000566550 FAM47DPA6NHR8 397 aa3.23□□□□□ -1.89
HERPUD1-211ENST00000566550 KCNU1A8MYU2 1149 aa3.23□□□□□ -1.89
HERPUD1-211ENST00000566550 FAM25EA8MYX2 175 aa3.23□□□□□ -1.89
HERPUD1-211ENST00000566550 CYP27B1O15528 508 aa3.23□□□□□ -1.89
HERPUD1-211ENST00000566550 CLDN3O15551 220 aa3.23□□□□□ -1.89
HERPUD1-211ENST00000566550 RNMTO43148 476 aaKnown RBP3.23□□□□□ -1.89
HERPUD1-211ENST00000566550 ZNF217O75362 1048 aa3.23□□□□□ -1.89
HERPUD1-211ENST00000566550 ERLIN1O75477 346 aa3.23□□□□□ -1.89
HERPUD1-211ENST00000566550 RAD51DO75771 328 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms