RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 GFERP55789 205 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 GSTM4Q03013 218 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 SLMAPQ14BN4 828 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 AMZ1Q400G9 498 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.53□□□□□ -0.88
CLK3-208ENST00000562626 PLEKHS1Q5SXH7 462 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 CDCP2Q5VXM1 449 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 FAM45BPQ6NSW5 357 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 USP53Q70EK8 1073 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 TRMT10CQ7L0Y3 403 aaKnown RBP9.53□□□□□ -0.88
CLK3-208ENST00000562626 RAB44Q7Z6P3 723 aaPredicted RBP9.53□□□□□ -0.88
CLK3-208ENST00000562626 SLC9B2Q86UD5 537 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 CHCHD4Q8N4Q1 142 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 FAM45AQ8TCE6 357 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 DCAKDQ8WVC6 231 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 ASZ1Q8WWH4 475 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 SLC44A1Q8WWI5 657 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 TFGQ92734 400 aaPredicted RBP9.53□□□□□ -0.88
CLK3-208ENST00000562626 INPP5DQ92835 1189 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 NAT6Q93015 286 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 PPM1MQ96MI6 270 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 FERD3LQ96RJ6 166 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 PAFAH2Q99487 392 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 DHRS4Q9BTZ2 278 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 TSPYL1Q9H0U9 437 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 CCDC68Q9H2F9 335 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 LRRN3Q9H3W5 708 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 XKR8Q9H6D3 395 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 SYNDIG1Q9H7V2 258 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 POT1Q9NUX5 634 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 CTNNAL1Q9UBT7 734 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 SLC39A10Q9ULF5 831 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 ICKQ9UPZ9 632 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 VWA7Q9Y334 891 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 PCDHGA1Q9Y5H4 931 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 COMMD10Q9Y6G5 202 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 A0A087WUV0 522 aaPredicted RBP9.52□□□□□ -0.89
CLK3-208ENST00000562626 A0A1W2PNU3 283 aaPredicted RBP9.52□□□□□ -0.89
CLK3-208ENST00000562626 KLHL33A6NCF5 533 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 LILRA5A6NI73 299 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 ARHGEF33A8MVX0 844 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 BTN3A3O00478 584 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 PFDN6O15212 129 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 HYAL3O43820 417 aaPredicted RBP9.52□□□□□ -0.89
CLK3-208ENST00000562626 C1orf105O95561 183 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 GP1BAP07359 652 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 ITGA2BP08514 1039 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 ABHD2P08910 425 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 SLC2A4P14672 509 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 PNLIPP16233 465 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 ZNF37AP17032 561 aaPredicted RBP9.52□□□□□ -0.89
CLK3-208ENST00000562626 SDHBP21912 280 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 CD9P21926 228 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 PEBP1P30086 187 aaKnown RBP9.52□□□□□ -0.89
CLK3-208ENST00000562626 PHBP35232 272 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 HSD17B3P37058 310 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 DUSP3P51452 185 aaPredicted RBP9.52□□□□□ -0.89
CLK3-208ENST00000562626 IRF9Q00978 393 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 DLG1Q12959 904 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 TMED2Q15363 201 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 ZKSCAN8Q15776 578 aaPredicted RBP9.52□□□□□ -0.89
CLK3-208ENST00000562626 GRTP1Q5TC63 336 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 HES3Q5TGS1 186 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 CEP128Q6ZU80 1094 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 TRIM48Q8IWZ4 208 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 SPATA6LQ8N4H0 392 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 OR52E1Q8NGJ3 308 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 OR2W6PQ8NHA6 318 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 DENND1AQ8TEH3 1009 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 UBLCP1Q8WVY7 318 aaPredicted RBP9.52□□□□□ -0.89
CLK3-208ENST00000562626 ADAMTS14Q8WXS8 1223 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 CDKL2Q92772 493 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 ZBTB9Q96C00 473 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 LINGO1Q96FE5 620 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 IL17FQ96PD4 163 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 CYTH2Q99418 400 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 SLC38A3Q99624 504 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 TSSK1BQ9BXA7 367 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 SEMA6CQ9H3T2 930 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 KIR3DX1Q9H7L2 352 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 NSMCE4AQ9NXX6 385 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 SCN3AQ9NY46 2000 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 KCNK4Q9NYG8 393 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 TAS2R13Q9NYV9 303 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 NCKIPSDQ9NZQ3 722 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 TRMT6Q9UJA5 497 aaKnown RBP9.52□□□□□ -0.89
CLK3-208ENST00000562626 KLK13Q9UKR3 277 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 CORO1CQ9ULV4 474 aaPredicted RBP9.52□□□□□ -0.89
CLK3-208ENST00000562626 ASF1AQ9Y294 204 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 FAM208BQ5VWN6 2430 aa9.52□□□□□ -0.89
CLK3-208ENST00000562626 D6RAR5 112 aa9.51□□□□□ -0.89
CLK3-208ENST00000562626 CDC7O00311 574 aa9.51□□□□□ -0.89
CLK3-208ENST00000562626 BTN3A1O00481 513 aa9.51□□□□□ -0.89
CLK3-208ENST00000562626 KPNA5O15131 536 aa9.51□□□□□ -0.89
CLK3-208ENST00000562626 KIF1CO43896 1103 aaKnown RBP9.51□□□□□ -0.89
CLK3-208ENST00000562626 PSIP1O75475 530 aaKnown RBP9.51□□□□□ -0.89
CLK3-208ENST00000562626 ALDOAP04075 364 aaKnown RBP9.51□□□□□ -0.89
CLK3-208ENST00000562626 ATP5DP30049 168 aa9.51□□□□□ -0.89
CLK3-208ENST00000562626 FOXC1Q12948 553 aa9.51□□□□□ -0.89
CLK3-208ENST00000562626 ILKQ13418 452 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms