RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 NCF1CA8MVU1 366 aaPredicted RBP10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 H3BNX3 289 aa10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 TFPTP0C1Z6 253 aa10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 OCM2P0CE71 109 aa10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 OCMP0CE72 109 aaPredicted RBP10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 NCF1P14598 390 aaPredicted RBP10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 ETV3P41162 512 aa10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 NSG1P42857 185 aa10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 POLR2LP62875 67 aaKnown RBP10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 FCHO2Q0JRZ9 810 aa10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 PCBP2Q15366 365 aaKnown RBP eCLIP10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 XKR7Q5GH72 579 aa10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 ZDHHC20Q5W0Z9 365 aa10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 TXNDC11Q6PKC3 985 aa10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 Q6ZVL8 140 aa10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 BORCS5Q969J3 196 aa10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 EME1Q96AY2 570 aa10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 ARRDC3Q96B67 414 aa10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 CLIP3Q96DZ5 547 aa10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 C19orf60Q96EN9 201 aa10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 LRIG1Q96JA1 1093 aa10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 CDCA3Q99618 268 aaPredicted RBP10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 TMEM79Q9BSE2 394 aa10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 AKTIPQ9H8T0 292 aa10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 DZANK1Q9NVP4 752 aa10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 GIMAP2Q9UG22 337 aa10.03□□□□□ -0.8
TUBGCP4-202ENST00000561691 XIRP2A4UGR9 3374 aa10.02□□□□□ -0.8
TUBGCP4-202ENST00000561691 UNC80Q8N2C7 3258 aa10.02□□□□□ -0.8
TUBGCP4-202ENST00000561691 TCF20Q9UGU0 1960 aaKnown RBP10.02□□□□□ -0.8
TUBGCP4-202ENST00000561691 OR7A17O14581 309 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 PIP5K1BO14986 540 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 TRIM16O95361 564 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 NFATC1O95644 943 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 ESRRBO95718 433 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 THRAP10827 490 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 HLA-EP13747 358 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 ZNF23P17027 643 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 AOAHP28039 575 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 DPP6P42658 865 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 HNRNPA1L2Q32P51 320 aaKnown RBP10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 NXNQ6DKJ4 435 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 TMEM214Q6NUQ4 689 aaKnown RBP10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 PAOXQ6QHF9 649 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 XKR5Q6UX68 686 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 SERPINA13PQ6UXR4 307 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 LIPIQ6XZB0 460 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 GET4Q7L5D6 327 aaPredicted RBP10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 RAB44Q7Z6P3 723 aaPredicted RBP10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 ADAMTSL2Q86TH1 951 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 FUNDC1Q8IVP5 155 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 OR52B6Q8NGF0 335 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 RP9Q8TA86 221 aaKnown RBP10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 CHPT1Q8WUD6 406 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 UBTD2Q8WUN7 234 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 TWIST2Q8WVJ9 160 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 MRPL38Q96DV4 380 aaKnown RBP10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 MYADMQ96S97 322 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 COPS8Q99627 209 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 GPATCH1Q9BRR8 931 aaKnown RBP10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 SEMA4BQ9NPR2 832 aaPredicted RBP10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 SLC52A3Q9NQ40 469 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 ITM2BQ9Y287 266 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 OARD1Q9Y530 152 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 NOX1Q9Y5S8 564 aa10.02□□□□□ -0.81
TUBGCP4-202ENST00000561691 ATP6AP2A0A1C7CYW4 349 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 AREL1O15033 823 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 FFAR2O15552 330 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 CNOT3O75175 753 aaKnown RBP10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 ATP6AP2O75787 350 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 SOD1P00441 154 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 CDH3P22223 829 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 GPX3P22352 226 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 RECQLP46063 649 aaPredicted RBP10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 ATP4BP51164 291 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 ERVPABLB-1P60509 514 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 GRB7Q14451 532 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 GRIN2CQ14957 1233 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 GRAMD1BQ3KR37 738 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 POM121L1PQ3SYA9 428 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 ZNF658BQ4V348 819 aaPredicted RBP10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 PPP2R2DQ66LE6 453 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 ANKRD54Q6NXT1 300 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 LPCAT2Q7L5N7 544 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 VRK3Q8IV63 474 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 CENPSQ8N2Z9 138 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 SNX31Q8N9S9 440 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 DDHD1Q8NEL9 900 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 SLC26A7Q8TE54 656 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 ULK4Q96C45 1275 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 COQ10AQ96MF6 247 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 ZNF382Q96SR6 550 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 PRPF18Q99633 342 aaKnown RBP10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 GDF15Q99988 308 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 S1PR5Q9H228 398 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 FAM83DQ9H4H8 585 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 NSUN3Q9H649 340 aaKnown RBP10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 RDH14Q9HBH5 336 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 PKD2L2Q9NZM6 624 aa10.01□□□□□ -0.81
TUBGCP4-202ENST00000561691 CD274Q9NZQ7 290 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms