RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-208ENST00000561059 FAM60AQ9NP50 221 aa12.98□□□□□ -0.33
PSME1-208ENST00000561059 LATS2Q9NRM7 1088 aa12.98□□□□□ -0.33
PSME1-208ENST00000561059 ACTR10Q9NZ32 417 aa12.98□□□□□ -0.33
PSME1-208ENST00000561059 SMARCAL1Q9NZC9 954 aa12.98□□□□□ -0.33
PSME1-208ENST00000561059 PLAGL1Q9UM63 463 aa12.98□□□□□ -0.33
PSME1-208ENST00000561059 PACSIN2Q9UNF0 486 aaPredicted RBP12.98□□□□□ -0.33
PSME1-208ENST00000561059 ICKQ9UPZ9 632 aa12.98□□□□□ -0.33
PSME1-208ENST00000561059 REXO2Q9Y3B8 237 aaKnown RBP12.98□□□□□ -0.33
PSME1-208ENST00000561059 MED13Q9UHV7 2174 aa12.98□□□□□ -0.33
PSME1-208ENST00000561059 SEMA7AO75326 666 aa12.97□□□□□ -0.33
PSME1-208ENST00000561059 AGFG2O95081 481 aa12.97□□□□□ -0.33
PSME1-208ENST00000561059 CYLC1P35663 651 aaPredicted RBP12.97□□□□□ -0.33
PSME1-208ENST00000561059 HADHAP40939 763 aa12.97□□□□□ -0.33
PSME1-208ENST00000561059 CSE1LP55060 971 aaKnown RBP12.97□□□□□ -0.33
PSME1-208ENST00000561059 COPS2P61201 443 aa12.97□□□□□ -0.33
PSME1-208ENST00000561059 MRPL49Q13405 166 aaKnown RBP12.97□□□□□ -0.33
PSME1-208ENST00000561059 NCF4Q15080 339 aa12.97□□□□□ -0.33
PSME1-208ENST00000561059 ZIC1Q15915 447 aa12.97□□□□□ -0.33
PSME1-208ENST00000561059 KYNUQ16719 465 aa12.97□□□□□ -0.33
PSME1-208ENST00000561059 CCDC38Q502W7 563 aa12.97□□□□□ -0.33
PSME1-208ENST00000561059 MLIPQ5VWP3 458 aa12.97□□□□□ -0.33
PSME1-208ENST00000561059 ARHGEF18Q6ZSZ5 1173 aa12.97□□□□□ -0.33
PSME1-208ENST00000561059 LMNTD1Q8N9Z9 388 aa12.97□□□□□ -0.33
PSME1-208ENST00000561059 ACRBPQ8NEB7 543 aa12.97□□□□□ -0.33
PSME1-208ENST00000561059 SEC14L1Q92503 715 aa12.97□□□□□ -0.33
PSME1-208ENST00000561059 TFGQ92734 400 aaPredicted RBP12.97□□□□□ -0.33
PSME1-208ENST00000561059 FERMT1Q9BQL6 677 aa12.97□□□□□ -0.33
PSME1-208ENST00000561059 NLNQ9BYT8 704 aa12.97□□□□□ -0.33
PSME1-208ENST00000561059 PITPNM3Q9BZ71 974 aa12.97□□□□□ -0.33
PSME1-208ENST00000561059 SPRTNQ9H040 489 aaPredicted RBP12.97□□□□□ -0.33
PSME1-208ENST00000561059 MLXIPLQ9NP71 852 aa12.97□□□□□ -0.33
PSME1-208ENST00000561059 SPHK1Q9NYA1 384 aa12.97□□□□□ -0.33
PSME1-208ENST00000561059 CIDEBQ9UHD4 219 aa12.97□□□□□ -0.33
PSME1-208ENST00000561059 R3HDM2Q9Y2K5 976 aaKnown RBP12.97□□□□□ -0.33
PSME1-208ENST00000561059 TDRKHQ9Y2W6 561 aaKnown RBP12.97□□□□□ -0.33
PSME1-208ENST00000561059 PCDHGA9Q9Y5G4 932 aaKnown RBP12.97□□□□□ -0.33
PSME1-208ENST00000561059 IGLV3-16A0A075B6K0 115 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 TRBV5-4A0A0C4DH59 114 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 A0A0U1RQJ8 604 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 TCRBV7S2A1N4TA0A589 114 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 A1L4Q6 167 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 GRID2IPA4D2P6 1211 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 KLHL33A6NCF5 533 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 C2orf74A8MZ97 194 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 E7EQ34 232 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 KRT86O43790 486 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 SORBS2O94875 1100 aaKnown RBP12.96□□□□□ -0.33
PSME1-208ENST00000561059 RAB40ALP0C0E4 278 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 CBSLP0DN79 551 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 UGT2B7P16662 529 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 PTMSP20962 102 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 PTPN7P35236 360 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 CBSP35520 551 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 VAV2P52735 878 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 GDF10P55107 478 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 RWDD2BP57060 319 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 BOP1Q14137 746 aaKnown RBP12.96□□□□□ -0.33
PSME1-208ENST00000561059 INPP5JQ15735 1006 aaPredicted RBP12.96□□□□□ -0.33
PSME1-208ENST00000561059 SKOR2Q2VWA4 1001 aaPredicted RBP12.96□□□□□ -0.33
PSME1-208ENST00000561059 C4orf17Q53FE4 359 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 SARM1Q6SZW1 724 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 UNC5AQ6ZN44 842 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 CCDC170Q8IYT3 715 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 CARFQ8N187 725 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 RBMXL3Q8N7X1 1067 aaKnown RBP12.96□□□□□ -0.33
PSME1-208ENST00000561059 Q8NA96 180 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 C19orf60Q96EN9 201 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 LRFN5Q96NI6 719 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 TFB2MQ9H5Q4 396 aaKnown RBP12.96□□□□□ -0.33
PSME1-208ENST00000561059 NLE1Q9NVX2 485 aaPredicted RBP12.96□□□□□ -0.33
PSME1-208ENST00000561059 IMPACTQ9P2X3 320 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 SERTAD3Q9UJW9 196 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 ASF1AQ9Y294 204 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 KLHL20Q9Y2M5 609 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 MAP4K5Q9Y4K4 846 aa12.96□□□□□ -0.33
PSME1-208ENST00000561059 EPN1Q9Y6I3 576 aaPredicted RBP12.96□□□□□ -0.33
PSME1-208ENST00000561059 C17orf113A0A1B0GUU1 675 aa12.95□□□□□ -0.34
PSME1-208ENST00000561059 MATN2O00339 956 aa12.95□□□□□ -0.34
PSME1-208ENST00000561059 CEACAM4O75871 244 aa12.95□□□□□ -0.34
PSME1-208ENST00000561059 TJP3O95049 919 aa12.95□□□□□ -0.34
PSME1-208ENST00000561059 PTMAP06454 111 aaKnown RBP12.95□□□□□ -0.34
PSME1-208ENST00000561059 TPBGLP0DKB5 382 aa12.95□□□□□ -0.34
PSME1-208ENST00000561059 EIF2S3LQ2VIR3 472 aaKnown RBP12.95□□□□□ -0.34
PSME1-208ENST00000561059 GPR33Q49SQ1 333 aa12.95□□□□□ -0.34
PSME1-208ENST00000561059 FHL5Q5TD97 284 aa12.95□□□□□ -0.34
PSME1-208ENST00000561059 KCTD11Q693B1 232 aa12.95□□□□□ -0.34
PSME1-208ENST00000561059 SLC6A19Q695T7 634 aa12.95□□□□□ -0.34
PSME1-208ENST00000561059 JMJD6Q6NYC1 403 aaPredicted RBP12.95□□□□□ -0.34
PSME1-208ENST00000561059 SPESP1Q6UW49 350 aa12.95□□□□□ -0.34
PSME1-208ENST00000561059 RAD9BQ6WBX8 426 aa12.95□□□□□ -0.34
PSME1-208ENST00000561059 HOOK3Q86VS8 718 aa12.95□□□□□ -0.34
PSME1-208ENST00000561059 C2orf73Q8N5S3 287 aaPredicted RBP12.95□□□□□ -0.34
PSME1-208ENST00000561059 C19orf47Q8N9M1 422 aaKnown RBP12.95□□□□□ -0.34
PSME1-208ENST00000561059 LRRC57Q8N9N7 239 aa12.95□□□□□ -0.34
PSME1-208ENST00000561059 GALNT11Q8NCW6 608 aa12.95□□□□□ -0.34
PSME1-208ENST00000561059 HEXDCQ8WVB3 486 aa12.95□□□□□ -0.34
PSME1-208ENST00000561059 ELMO1Q92556 727 aa12.95□□□□□ -0.34
PSME1-208ENST00000561059 N4BP2L2Q92802 583 aaPredicted RBP12.95□□□□□ -0.34
PSME1-208ENST00000561059 CDKN2AIPNLQ96HQ2 116 aa12.95□□□□□ -0.34
PSME1-208ENST00000561059 TMEM121Q9BTD3 319 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms