RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 CAPNS1P04632 268 aa16.37■□□□□ 0.21
RPL28-209ENST00000560055 TPBGLP0DKB5 382 aa16.37■□□□□ 0.21
RPL28-209ENST00000560055 AMD1P17707 334 aa16.37■□□□□ 0.21
RPL28-209ENST00000560055 CD9P21926 228 aa16.37■□□□□ 0.21
RPL28-209ENST00000560055 ABCG1P45844 678 aa16.37■□□□□ 0.21
RPL28-209ENST00000560055 CUL1Q13616 776 aa16.37■□□□□ 0.21
RPL28-209ENST00000560055 KRT33BQ14525 404 aa16.37■□□□□ 0.21
RPL28-209ENST00000560055 PLCL1Q15111 1095 aa16.37■□□□□ 0.21
RPL28-209ENST00000560055 RBM20Q5T481 1227 aaKnown RBP16.37■□□□□ 0.21
RPL28-209ENST00000560055 UNC5DQ6UXZ4 953 aa16.37■□□□□ 0.21
RPL28-209ENST00000560055 PLXDC1Q8IUK5 500 aa16.37■□□□□ 0.21
RPL28-209ENST00000560055 SIDT2Q8NBJ9 832 aaKnown RBP16.37■□□□□ 0.21
RPL28-209ENST00000560055 OR52E1Q8NGJ3 308 aa16.37■□□□□ 0.21
RPL28-209ENST00000560055 CD200R1Q8TD46 325 aa16.37■□□□□ 0.21
RPL28-209ENST00000560055 IFT81Q8WYA0 676 aa16.37■□□□□ 0.21
RPL28-209ENST00000560055 ZCCHC14Q8WYQ9 949 aaKnown RBP16.37■□□□□ 0.21
RPL28-209ENST00000560055 PRR11Q96HE9 360 aaPredicted RBP16.37■□□□□ 0.21
RPL28-209ENST00000560055 CCDC74BQ96LY2 380 aa16.37■□□□□ 0.21
RPL28-209ENST00000560055 FMO2Q99518 471 aa16.37■□□□□ 0.21
RPL28-209ENST00000560055 NDNQ99608 321 aa16.37■□□□□ 0.21
RPL28-209ENST00000560055 HGH1Q9BTY7 390 aa16.37■□□□□ 0.21
RPL28-209ENST00000560055 STRADBQ9C0K7 418 aa16.37■□□□□ 0.21
RPL28-209ENST00000560055 TRIT1Q9H3H1 467 aaKnown RBP16.37■□□□□ 0.21
RPL28-209ENST00000560055 MTRF1LQ9UGC7 380 aaKnown RBP16.37■□□□□ 0.21
RPL28-209ENST00000560055 DHRS7Q9Y394 339 aa16.37■□□□□ 0.21
RPL28-209ENST00000560055 CCDC187A0A096LP49 1063 aa16.36■□□□□ 0.21
RPL28-209ENST00000560055 OR5K3A6NET4 321 aa16.36■□□□□ 0.21
RPL28-209ENST00000560055 CXorf49A8MYA2 514 aaPredicted RBP16.36■□□□□ 0.21
RPL28-209ENST00000560055 HGSO14964 777 aaPredicted RBP16.36■□□□□ 0.21
RPL28-209ENST00000560055 SPAG6O75602 509 aa16.36■□□□□ 0.21
RPL28-209ENST00000560055 MATN4O95460 622 aa16.36■□□□□ 0.21
RPL28-209ENST00000560055 MPSTP25325 297 aa16.36■□□□□ 0.21
RPL28-209ENST00000560055 CDKN2DP55273 166 aa16.36■□□□□ 0.21
RPL28-209ENST00000560055 GFERP55789 205 aa16.36■□□□□ 0.21
RPL28-209ENST00000560055 ABRQ12979 859 aa16.36■□□□□ 0.21
RPL28-209ENST00000560055 PRKG2Q13237 762 aa16.36■□□□□ 0.21
RPL28-209ENST00000560055 EIF3IQ13347 325 aaKnown RBP16.36■□□□□ 0.21
RPL28-209ENST00000560055 C16orf72Q14CZ0 275 aa16.36■□□□□ 0.21
RPL28-209ENST00000560055 ACSBG2Q5FVE4 666 aa16.36■□□□□ 0.21
RPL28-209ENST00000560055 PHF19Q5T6S3 580 aa16.36■□□□□ 0.21
RPL28-209ENST00000560055 CEP128Q6ZU80 1094 aa16.36■□□□□ 0.21
RPL28-209ENST00000560055 ARHGAP22Q7Z5H3 698 aa16.36■□□□□ 0.21
RPL28-209ENST00000560055 ZC3HC1Q86WB0 502 aaKnown RBP16.36■□□□□ 0.21
RPL28-209ENST00000560055 SPNS2Q8IVW8 549 aa16.36■□□□□ 0.21
RPL28-209ENST00000560055 WDR36Q8NI36 951 aaKnown RBP16.36■□□□□ 0.21
RPL28-209ENST00000560055 GPR21Q99679 349 aa16.36■□□□□ 0.21
RPL28-209ENST00000560055 NRTNQ99748 197 aa16.36■□□□□ 0.21
RPL28-209ENST00000560055 TWSG1Q9GZX9 223 aa16.36■□□□□ 0.21
RPL28-209ENST00000560055 TSPYL1Q9H0U9 437 aa16.36■□□□□ 0.21
RPL28-209ENST00000560055 NSMCE4AQ9NXX6 385 aa16.36■□□□□ 0.21
RPL28-209ENST00000560055 POLG2Q9UHN1 485 aa16.36■□□□□ 0.21
RPL28-209ENST00000560055 SATB2Q9UPW6 733 aa16.36■□□□□ 0.21
RPL28-209ENST00000560055 PCDHGA8Q9Y5G5 932 aa16.36■□□□□ 0.21
RPL28-209ENST00000560055 APC2O95996 2303 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 PMS2P1A4D2B8 440 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 SRRM3A6NNA2 597 aaPredicted RBP16.35■□□□□ 0.21
RPL28-209ENST00000560055 CAPN5O15484 640 aaPredicted RBP16.35■□□□□ 0.21
RPL28-209ENST00000560055 VPS26AO75436 327 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 PIAS1O75925 651 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 ANKRD34CP0C6C1 535 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 RHOXF2BP0C7M4 288 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 LSSP48449 732 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 PPP1CAP62136 330 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 GRB7Q14451 532 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 TTLL9Q3SXZ7 439 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 DNTTIP2Q5QJE6 756 aaKnown RBP16.35■□□□□ 0.21
RPL28-209ENST00000560055 KLHL35Q6PF15 583 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 IGF2-ASQ6U949 168 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 NEK10Q6ZWH5 1172 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 STRA8Q7Z7C7 330 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 RASGRP3Q8IV61 690 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 DCUN1D3Q8IWE4 304 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 IFT20Q8IY31 132 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 RCBTB1Q8NDN9 531 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 OR4E2Q8NGC2 313 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 LCN9Q8WX39 176 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 INPP5DQ92835 1189 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 NXPE2Q96DL1 559 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 RHOXF2Q9BQY4 288 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 MENTQ9BUN1 341 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 ZMYND15Q9H091 742 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 POLR1BQ9H9Y6 1135 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 HRASLS2Q9NWW9 162 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 TAS2R13Q9NYV9 303 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 SEMA5BQ9P283 1151 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 DKK4Q9UBT3 224 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 ICKQ9UPZ9 632 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 RUVBL2Q9Y230 463 aaKnown RBP16.35■□□□□ 0.21
RPL28-209ENST00000560055 NFS1Q9Y697 457 aa16.35■□□□□ 0.21
RPL28-209ENST00000560055 TMEM8BA6NDV4 472 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 TAF4O00268 1085 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 EIF3FO00303 357 aaPredicted RBP16.34■□□□□ 0.21
RPL28-209ENST00000560055 PLD2O14939 933 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 TOX3O15405 576 aaPredicted RBP16.34■□□□□ 0.21
RPL28-209ENST00000560055 DXOO77932 396 aaKnown RBP16.34■□□□□ 0.21
RPL28-209ENST00000560055 C1orf105O95561 183 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 RPN2P04844 631 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 MPOP05164 745 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 CBSLP0DN79 551 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 ENO3P13929 434 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms