RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 OR6C76A6NM76 312 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 PMS2P5A8MQ11 134 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 SNAP23O00161 211 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 ZNF263O14978 683 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 HMMRO75330 724 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 SEC22BO75396 215 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 FGF5P12034 268 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 ZNF23P17027 643 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 GAP43P17677 238 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 POLR2CP19387 275 aaPredicted RBP3.54□□□□□ -1.84
SPG11-218ENST00000559754 CAPZA1P52907 286 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 LINC01547P58512 204 aaPredicted RBP3.54□□□□□ -1.84
SPG11-218ENST00000559754 KRTAP10-5P60370 271 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 ISL1P61371 349 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 TUBB4BP68371 445 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 PTK6Q13882 451 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 ZNF273Q14593 569 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 DRAP1Q14919 205 aaPredicted RBP3.54□□□□□ -1.84
SPG11-218ENST00000559754 PPA1Q15181 289 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 NAB2Q15742 525 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 ALG11Q2TAA5 492 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 TMEM30BQ3MIR4 351 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 IGSF11Q5DX21 431 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 NHSL2Q5HYW2 709 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 SIRPB2Q5JXA9 342 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 ARMC4Q5T2S8 1044 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 STXBP5Q5T5C0 1151 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 ACSM2BQ68CK6 577 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 ZNF704Q6ZNC4 412 aaPredicted RBP3.54□□□□□ -1.84
SPG11-218ENST00000559754 OTOAQ7RTW8 1153 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 NLRP14Q86W24 1093 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 MCEMP1Q8IX19 187 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 RNF168Q8IYW5 571 aaPredicted RBP3.54□□□□□ -1.84
SPG11-218ENST00000559754 SIX6OS1Q8N1H7 587 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 GUF1Q8N442 669 aaKnown RBP3.54□□□□□ -1.84
SPG11-218ENST00000559754 IQUBQ8NA54 791 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 TSPAN14Q8NG11 270 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 FAM76AQ8TAV0 307 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 MOAP1Q96BY2 351 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 PABPC5Q96DU9 382 aaKnown RBP3.54□□□□□ -1.84
SPG11-218ENST00000559754 ALG14Q96F25 216 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 ELMOD3Q96FG2 381 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 SCRN2Q96FV2 425 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 DACH2Q96NX9 599 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 TSGA13Q96PP4 275 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 GAD1Q99259 594 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 SEPT5Q99719 369 aaPredicted RBP3.54□□□□□ -1.84
SPG11-218ENST00000559754 TMEM47Q9BQJ4 181 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 FERMT1Q9BQL6 677 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 FSD1Q9BTV5 496 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 POLR3CQ9BUI4 534 aaPredicted RBP3.54□□□□□ -1.84
SPG11-218ENST00000559754 TNMDQ9H2S6 317 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 KIF9Q9HAQ2 790 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 CRNNQ9UBG3 495 aaPredicted RBP3.54□□□□□ -1.84
SPG11-218ENST00000559754 CNOT8Q9UFF9 292 aaKnown RBP3.54□□□□□ -1.84
SPG11-218ENST00000559754 BLOC1S6Q9UL45 172 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 CMAHPQ9Y471 501 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 FAM237AA0A1B0GTK4 181 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 NDC80O14777 642 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 ZNHIT1O43257 154 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 PCDH7O60245 1069 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 RTN2O75298 545 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 TADA2AO75478 443 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 OLFM2O95897 454 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 LDLRP01130 860 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 EGFP01133 1207 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 SLC4A1P02730 911 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 INHBAP08476 426 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 PCP11498 1178 aaKnown RBP3.53□□□□□ -1.84
SPG11-218ENST00000559754 ZNF182P17025 639 aaPredicted RBP3.53□□□□□ -1.84
SPG11-218ENST00000559754 IL10P22301 178 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 MAPK3P27361 379 aaPredicted RBP3.53□□□□□ -1.84
SPG11-218ENST00000559754 HOXC9P31274 260 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 MC5RP33032 325 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 NR0B1P51843 470 aaKnown RBP3.53□□□□□ -1.84
SPG11-218ENST00000559754 TAS2R38P59533 333 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 CXCL9Q07325 125 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 GRIK2Q13002 908 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 ITGA7Q13683 1181 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 TAF7Q15545 349 aaPredicted RBP3.53□□□□□ -1.84
SPG11-218ENST00000559754 LETM2Q2VYF4 491 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 MYLK3Q32MK0 819 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 CXorf66Q5JRM2 361 aaPredicted RBP3.53□□□□□ -1.84
SPG11-218ENST00000559754 DCST1Q5T197 706 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 HIST2H2BCQ6DN03 193 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 SLC35E4Q6ICL7 350 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 CLEC17AQ6ZS10 378 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 CAMKMTQ7Z624 323 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 GPR180Q86V85 440 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 IQCHQ86VS3 1027 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 CAMKVQ8NCB2 501 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 OR10V1Q8NGI7 309 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 CTCFLQ8NI51 663 aaPredicted RBP3.53□□□□□ -1.84
SPG11-218ENST00000559754 UTP15Q8TED0 518 aaKnown RBP3.53□□□□□ -1.84
SPG11-218ENST00000559754 DNAAF4Q8WXU2 420 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 PDLIM5Q96HC4 596 aaKnown RBP3.53□□□□□ -1.84
SPG11-218ENST00000559754 HARBI1Q96MB7 349 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 TMEM237Q96Q45 408 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 EGFL8Q99944 293 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 MGME1Q9BQP7 344 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms